PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C3'H/CYP98A
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Protein/Isoform Record Pathway Family Confidence Status
Bca_GomC01g24120.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC01g35550.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC01g40130.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC01g40570.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC01g48600.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC01g48620.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC01g48630.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC01g48640.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC01g48650.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC01g48660.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC01g48670.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC01g49470.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC01g49620.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC01g49740.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC01g49800.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC01g57700.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC01g58500.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC02g03780.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC02g04000.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC02g04480.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC02g08830.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC02g17260.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC02g17350.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC02g19030.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC02g23850.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC02g23860.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC02g27610.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC02g28090.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC02g30630.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC02g36160.mRNA1 Phenylpropanoid C3'H/CYP98A medium pass
Bca_GomC02g36320.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC02g38690.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC02g39840.mRNA1 Phenylpropanoid C3'H/CYP98A medium pass
Bca_GomC02g40760.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC02g40780.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC02g40930.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC02g44220.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC02g49440.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC02g49890.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC02g49900.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC02g49910.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC02g49920.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC02g49930.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC02g49940.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC02g49950.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC02g50780.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC02g52150.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC02g52160.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC02g53110.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC02g53960.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline