PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C3'H/CYP98A
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Protein/Isoform Record Pathway Family Confidence Status
Bca_GomC03g81420.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC03g82010.mRNA1 Phenylpropanoid C3'H/CYP98A high pass
Bca_GomC03g82020.mRNA1 Phenylpropanoid C3'H/CYP98A high pass
Bca_GomC03g82040.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC03g86640.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC03g88360.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC03g95160.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC04g02120.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC04g02410.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC04g02980.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC04g04700.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC04g07500.mRNA2 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC04g07520.mRNA2 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC04g08050.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC04g17390.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC04g17630.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC04g20080.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC04g21610.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC04g23340.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC04g24170.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC04g30180.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC04g37730.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC04g40170.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC04g43030.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC04g43290.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC04g43320.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC04g45630.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC04g46770.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC04g51260.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC04g51300.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC04g51310.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC04g52390.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC04g52410.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC04g55690.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC04g61410.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC04g62020.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC04g62040.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC04g62050.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC04g62240.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC04g65060.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC04g65070.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC04g65080.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC04g65090.mRNA2 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC04g65100.mRNA1 Phenylpropanoid C3'H/CYP98A high pass
Bca_GomC04g65670.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC05g01800.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC05g01890.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC05g02590.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC05g02830.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC05g02890.mRNA1 Phenylpropanoid C3'H/CYP98A medium pass