PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C3'H/CYP98A
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Gene Pathway Family Confidence Status
Bca_GomB02g07310.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB02g07320.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB02g07330.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB02g07800.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB02g08010.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB02g08020.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB02g08030.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB02g08110.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB02g08580.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB02g102050.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB02g102060.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB02g11170.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB02g14230.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB02g14600.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB02g14880.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB02g17320.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB02g19100.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB02g19140.mRNA1 Phenylpropanoid C3'H/CYP98A high pass
Bca_GomB02g19150.mRNA1 Phenylpropanoid C3'H/CYP98A high pass
Bca_GomB02g19570.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB02g20510.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB02g22020.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB02g28390.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB02g32290.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB02g32420.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB02g32680.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB02g32980.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB02g35560.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB02g36320.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB02g44330.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB02g46630.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB02g47190.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB02g48350.mRNA1 Phenylpropanoid C3'H/CYP98A high pass
Bca_GomB02g51120.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB02g51130.mRNA1 Phenylpropanoid C3'H/CYP98A high pass
Bca_GomB02g51340.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB02g51390.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB02g52490.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB02g52650.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB02g52700.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB02g53340.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB02g60870.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB02g60880.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB02g60920.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB02g61470.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB02g67470.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB02g67480.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB02g67500.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB02g67510.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB02g67520.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline