PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

/

Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C3'H/CYP98A
Reset
Protein/Isoform Record Pathway Family Confidence Status
Bca_GomB05g01150.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB05g06330.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB05g08580.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB05g09930.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB05g10040.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB05g10220.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB05g10620.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB05g10630.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB05g11890.mRNA2 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB05g11910.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB05g11920.mRNA1 Phenylpropanoid C3'H/CYP98A medium pass
Bca_GomB05g11940.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB05g11950.mRNA1 Phenylpropanoid C3'H/CYP98A high pass
Bca_GomB05g12190.mRNA1 Phenylpropanoid C3'H/CYP98A high pass
Bca_GomB05g12200.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB05g12220.mRNA2 Phenylpropanoid C3'H/CYP98A high pass
Bca_GomB05g12230.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB05g12240.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB05g12250.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB05g13020.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB05g13100.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB05g13140.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB05g17700.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB05g29130.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB05g31100.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB05g32290.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB05g35590.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB05g35600.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB05g35610.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB05g35650.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB05g36090.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB05g38250.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB05g38910.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB05g44010.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB05g44740.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB05g52850.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB05g52870.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB05g55710.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB05g62670.mRNA2 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB05g64050.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB05g70340.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB05g74150.mRNA1 Phenylpropanoid C3'H/CYP98A medium pass
Bca_GomB05g76090.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB05g78150.mRNA1 Phenylpropanoid C3'H/CYP98A medium pass
Bca_GomB05g81210.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB05g84460.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB06g00280.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB06g00300.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB06g00990.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB06g09040.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline