PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C3'H/CYP98A
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Protein/Isoform Record Pathway Family Confidence Status
Bca_GomB06g12660.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB06g13250.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB06g13610.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB06g13800.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB06g14200.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB06g17040.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB06g17070.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB06g17350.mRNA2 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB06g17490.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB06g23490.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB06g23500.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB06g23570.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB06g31110.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB06g31120.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB06g31170.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB06g32080.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB06g32550.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB06g33120.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB06g33700.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB06g35700.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB06g38380.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB06g38410.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB06g38660.mRNA2 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB06g51700.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB06g52260.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB06g53780.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB06g54070.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB06g55590.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB06g58360.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB06g59580.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB06g69200.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB06g69210.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB06g70000.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB06g70720.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB06g70810.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB06g71760.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB06g73990.mRNA1 Phenylpropanoid C3'H/CYP98A high pass
Bca_GomB06g74040.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB06g75220.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB06g75880.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB06g76250.mRNA1 Phenylpropanoid C3'H/CYP98A medium pass
Bca_GomB06g76260.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB06g83530.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB06g83600.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB07g02390.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB07g03880.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB07g05440.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB07g09500.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB07g17790.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB07g17880.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline