PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C3'H/CYP98A
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Protein/Isoform Record Pathway Family Confidence Status
Bca_GomB08g20320.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB08g23450.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB08g25500.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB08g25630.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB08g27580.mRNA1 Phenylpropanoid C3'H/CYP98A high pass
Bca_GomB08g34670.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB08g36950.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB08g39340.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB08g41140.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB08g44660.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB08g45630.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB08g49220.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB08g49250.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB08g52310.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB08g52750.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB08g53600.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB08g63720.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB08g65870.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB08g65990.mRNA1 Phenylpropanoid C3'H/CYP98A medium pass
Bca_GomB08g77290.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB08g80310.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomB08g84240.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB08g84270.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB08g91310.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB08g91370.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomB08g92910.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC01g00940.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC01g02310.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC01g02320.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC01g02690.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC01g02910.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC01g03630.mRNA1 Phenylpropanoid C3'H/CYP98A high pass
Bca_GomC01g03650.mRNA1 Phenylpropanoid C3'H/CYP98A high pass
Bca_GomC01g03680.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC01g03690.mRNA1 Phenylpropanoid C3'H/CYP98A medium pass
Bca_GomC01g04030.mRNA1 Phenylpropanoid C3'H/CYP98A medium pass
Bca_GomC01g04040.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC01g04070.mRNA1 Phenylpropanoid C3'H/CYP98A high pass
Bca_GomC01g04080.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC01g04100.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC01g04110.mRNA2 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC01g04130.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC01g06120.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC01g06190.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC01g11330.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC01g11360.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC01g17470.mRNA1 Phenylpropanoid C3'H/CYP98A low borderline
Bca_GomC01g18320.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC01g18890.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline
Bca_GomC01g20790.mRNA1 Phenylpropanoid C3'H/CYP98A medium borderline