PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Protein/Isoform Record Pathway Family Confidence Status
Bca_GomC01g49470.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC01g57700.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC02g03780.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC02g04000.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC02g04480.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC02g19030.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomC02g23850.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC02g23860.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC02g28090.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomC02g30630.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC02g36160.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC02g38690.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomC02g39840.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC02g40760.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomC02g40780.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC02g40930.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC02g44220.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC02g49440.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC02g49890.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomC02g49900.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC02g49910.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC02g49920.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC02g49930.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC02g49940.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC02g50780.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC02g52150.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomC02g52160.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomC02g53960.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC02g56420.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC02g56480.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomC02g56510.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomC02g56520.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC02g56750.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC03g02860.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC03g02870.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC03g02880.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC03g05910.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC03g05920.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomC03g09500.mRNA3 Rosmarinic Acid C4H low borderline
Bca_GomC03g09730.mRNA2 Rosmarinic Acid C4H low borderline
Bca_GomC03g10280.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC03g10490.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC03g10550.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC03g21450.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC03g21460.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomC03g23580.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC03g25840.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomC03g25850.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomC03g25960.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomC03g32000.mRNA1 Rosmarinic Acid C4H medium pass