PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
Bca_GomB02g51340.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB02g51390.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB02g52490.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB02g52650.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB02g52700.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB02g53340.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB02g60870.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB02g60880.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB02g60920.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB02g61470.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB02g67470.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB02g67480.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB02g67500.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB02g67510.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB02g67520.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB02g67770.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB02g67780.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB02g67790.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB02g67800.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB02g67810.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB02g67830.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB02g67840.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB02g67850.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB02g68740.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB02g68750.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB02g68760.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB02g69360.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB02g69370.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB02g74100.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB02g74540.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB02g76820.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB02g77120.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB02g77960.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB02g77970.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB02g82310.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB02g82470.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB02g82480.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB02g82490.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB02g82930.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB02g83380.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB02g83510.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB02g85890.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB02g86260.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB02g93720.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB02g96880.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB02g96890.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB02g97180.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB02g97330.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB02g97390.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB02g97890.mRNA1 Rosmarinic Acid C4H low borderline