PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Protein/Isoform Record Pathway Family Confidence Status
Bca_GomB04g00520.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB04g00560.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB04g01010.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB04g02250.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB04g07780.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB04g08420.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB04g09710.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB04g10240.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB04g10290.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB04g10340.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB04g10350.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB04g12160.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB04g14510.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB04g14630.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB04g14660.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB04g15370.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB04g15420.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB04g18380.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB04g18410.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB04g18420.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB04g20500.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB04g20510.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB04g20520.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB04g20530.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB04g20540.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB04g20550.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB04g20560.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB04g20610.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB04g20650.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB04g20800.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB04g25840.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB04g26000.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB04g26610.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB04g26620.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB04g26630.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB04g27770.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB04g27780.mRNA2 Rosmarinic Acid C4H low borderline
Bca_GomB04g27790.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB04g27810.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB04g27840.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB04g27850.mRNA2 Rosmarinic Acid C4H low borderline
Bca_GomB04g28430.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB04g28440.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB04g28460.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB04g28480.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB04g30390.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB04g31720.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB04g34050.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB04g34370.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB04g34380.mRNA1 Rosmarinic Acid C4H low borderline