PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Protein/Isoform Record Pathway Family Confidence Status
Bca_GomB07g05440.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB07g17790.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB07g17880.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB07g18540.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB07g19300.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB07g24120.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB07g24130.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB07g24140.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB07g26720.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB07g27810.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB07g30350.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB07g30360.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB07g38530.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB07g39330.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB07g39340.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB07g41750.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB07g41850.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB07g44440.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB07g48390.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB07g48460.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB07g48490.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB07g48550.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB07g49020.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB07g52120.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB07g52150.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB07g52360.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB07g52380.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB07g52410.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB07g56250.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB07g56260.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB07g56270.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB07g56300.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB07g60890.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB07g67740.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB07g79990.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB08g01130.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB08g03390.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB08g03470.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB08g03690.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB08g03970.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB08g03980.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB08g04200.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB08g20210.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB08g20220.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB08g25500.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB08g25510.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB08g25630.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB08g27580.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB08g34670.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomB08g36950.mRNA1 Rosmarinic Acid C4H low borderline