PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CODM/T6ODM
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Gene Pathway Family Confidence Status
Bca_GomC01g49590.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC01g50480.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC01g51810.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC01g55650.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC02g03910.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC02g03960.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC02g03990.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC02g04550.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC02g07150.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC02g35740.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC02g35750.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC03g05020.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC03g05030.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC03g05050.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC03g05470.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC03g10450.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC03g11140.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC03g13960.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC03g17280.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC03g17820.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC03g17830.mRNA1 Alkaloid CODM/T6ODM low borderline
Bca_GomC03g19660.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC03g19670.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC03g19680.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC03g19690.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC03g19700.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC03g40780.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC03g40800.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC03g48990.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC03g49910.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC03g53750.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC03g53760.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC03g66460.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC04g06450.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC04g19780.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC04g31020.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC04g47500.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC04g47520.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC04g47530.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC04g52690.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC04g52700.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC04g52710.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC04g53010.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC04g55720.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC04g57950.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC04g59410.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC04g64000.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC04g66420.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC05g04510.mRNA1 Alkaloid CODM/T6ODM medium borderline
Bca_GomC05g04520.mRNA1 Alkaloid CODM/T6ODM medium borderline