PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
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Protein/Isoform Record Pathway Family Confidence Status
Bca_GomB01g01640.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB01g03710.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB01g03720.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB01g06230.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB01g06240.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB01g24310.mRNA1 Phenylpropanoid CSE low borderline
Bca_GomB01g24370.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB01g42930.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB01g42970.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB01g42980.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB01g67460.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB02g04970.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB02g105470.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB02g16920.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB02g32620.mRNA1 Phenylpropanoid CSE low borderline
Bca_GomB02g35860.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB02g39270.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB02g42500.mRNA1 Phenylpropanoid CSE low borderline
Bca_GomB02g42810.mRNA1 Phenylpropanoid CSE low borderline
Bca_GomB02g59270.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB02g62310.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB02g76900.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB03g01470.mRNA1 Phenylpropanoid CSE low borderline
Bca_GomB03g04710.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB03g14200.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB03g21650.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB03g39380.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB03g47290.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB03g53550.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB03g85860.mRNA1 Phenylpropanoid CSE low borderline
Bca_GomB03g91840.mRNA1 Phenylpropanoid CSE low borderline
Bca_GomB04g25530.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB04g27510.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB04g46750.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB04g46820.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB04g46830.mRNA1 Phenylpropanoid CSE low borderline
Bca_GomB04g46860.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB04g46960.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB04g53500.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB04g66510.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB04g71660.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB05g02760.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB05g10810.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB05g12310.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB05g13860.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB05g27780.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB05g27860.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB05g34900.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB05g37830.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB05g57370.mRNA1 Phenylpropanoid CSE medium pass