PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Bca_GomC03g19150.mRNA1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Bca_GomC03g36000.mRNA1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Bca_GomC03g39090.mRNA1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Bca_GomC03g67580.mRNA1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Bca_GomC03g67590.mRNA2 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Bca_GomC03g80590.mRNA2 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Bca_GomC03g82120.mRNA1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Bca_GomC04g15790.mRNA1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Bca_GomC04g23690.mRNA1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Bca_GomC04g24850.mRNA1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Bca_GomC04g29620.mRNA1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Bca_GomC04g35060.mRNA1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Bca_GomC04g46540.mRNA1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Bca_GomC04g60120.mRNA1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Bca_GomC04g60130.mRNA1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Bca_GomC05g01400.mRNA1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Bca_GomC05g07770.mRNA1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Bca_GomC05g11170.mRNA1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Bca_GomC05g32000.mRNA1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Bca_GomC05g46200.mRNA1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Bca_GomC05g46210.mRNA1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Bca_GomC06g04040.mRNA1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Bca_GomC06g07960.mRNA1 Phenylpropanoid CSE low borderline CSE__00002__sp_Q9C942_CSE_ARATH
Bca_GomC06g07970.mRNA1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Bca_GomC06g07980.mRNA1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Bca_GomC06g12960.mRNA1 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Bca_GomC06g19550.mRNA1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Bca_GomC06g35700.mRNA1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Bca_GomC07g29880.mRNA1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Bca_GomC07g47670.mRNA1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Bca_GomC07g48430.mRNA1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Bca_GomC08g05270.mRNA1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Bca_GomC08g05280.mRNA1 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Bca_GomC08g05370.mRNA1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Bca_GomC08g05380.mRNA1 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Bca_GomC08g06680.mRNA1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Bca_GomC08g09060.mRNA1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Bca_GomC08g23210.mRNA1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Bca_GomC08g30060.mRNA1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Bca_GomC08g31370.mRNA1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Bca_GomC08g31400.mRNA1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Bca_GomC08g32400.mRNA1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Bca_GomC08g36990.mRNA1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Bca_GomC08g46470.mRNA1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Bca_GomC09g48440.mRNA1 Phenylpropanoid CSE low borderline CSE__00002__sp_Q9C942_CSE_ARATH
Bca_GomC09g54290.mRNA1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Bca_GomC09g63420.mRNA1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL