PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Bca_GomC08g15310.mRNA1 Terpenoid CYP76 low borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Bca_GomC08g23800.mRNA1 Terpenoid CYP76 low borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
Bca_GomC08g24760.mRNA1 Terpenoid CYP76 low borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Bca_GomC08g29030.mRNA1 Terpenoid CYP76 low borderline CYP76__00018__sp_Q69X58_C76M7_ORYSJ
Bca_GomC08g29100.mRNA1 Terpenoid CYP76 low borderline CYP76__00018__sp_Q69X58_C76M7_ORYSJ
Bca_GomC08g29270.mRNA1 Terpenoid CYP76 low borderline CYP76__00018__sp_Q69X58_C76M7_ORYSJ
Bca_GomC08g35190.mRNA1 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomC08g43630.mRNA1 Terpenoid CYP76 medium pass CYP76__00014__sp_I3PFJ5_C76AD_BETVU
Bca_GomC08g45580.mRNA1 Terpenoid CYP76 medium pass CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
Bca_GomC08g49270.mRNA1 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomC08g49540.mRNA1 Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Bca_GomC08g57920.mRNA1 Terpenoid CYP76 medium pass CYP76__00023__sp_S4UX02_CYPH1_SALMI
Bca_GomC08g58360.mRNA2 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomC08g58370.mRNA1 Terpenoid CYP76 medium pass CYP76__00013__sp_D1MI46_C76BA_SWEMU
Bca_GomC08g59460.mRNA1 Terpenoid CYP76 low borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Bca_GomC08g61490.mRNA1 Terpenoid CYP76 low borderline CYP76__00023__sp_S4UX02_CYPH1_SALMI
Bca_GomC08g65040.mRNA1 Terpenoid CYP76 medium pass CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
Bca_GomC09g02530.mRNA1 Terpenoid CYP76 low borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Bca_GomC09g06030.mRNA1 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomC09g19590.mRNA1 Terpenoid CYP76 medium pass CYP76__00023__sp_S4UX02_CYPH1_SALMI
Bca_GomC09g24940.mRNA1 Terpenoid CYP76 low borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Bca_GomC09g26990.mRNA1 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Bca_GomC09g50530.mRNA1 Terpenoid CYP76 low borderline CYP76__00002__sp_A0A0C5QRZ2_C76H2_SALFT
Bca_GomC09g50720.mRNA1 Terpenoid CYP76 medium pass CYP76__00002__sp_A0A0C5QRZ2_C76H2_SALFT
Bca_GomC09g56250.mRNA1 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomC09g57440.mRNA1 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Bca_GomC09g60110.mRNA1 Terpenoid CYP76 low borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Bca_GomC09g60380.mRNA1 Terpenoid CYP76 low borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Bca_GomC09g60940.mRNA1 Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Bca_GomC09g61200.mRNA1 Terpenoid CYP76 medium borderline CYP76__00023__sp_S4UX02_CYPH1_SALMI
Bca_GomC09g61210.mRNA1 Terpenoid CYP76 medium borderline CYP76__00023__sp_S4UX02_CYPH1_SALMI
Bca_GomC09g63050.mRNA1 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Bca_GomC09g63100.mRNA1 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Bca_GomC09g63200.mRNA1 Terpenoid CYP76 medium pass CYP76__00016__sp_P0DXJ6_C7631_LOPWI