PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

/

Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
Reset
Gene Pathway Family Confidence Status Best Target
Bca_GomB02g48350.mRNA1 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Bca_GomB02g51340.mRNA1 Terpenoid CYP76 low borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Bca_GomB02g51390.mRNA1 Terpenoid CYP76 low borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Bca_GomB02g52490.mRNA1 Terpenoid CYP76 medium pass CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Bca_GomB02g52650.mRNA1 Terpenoid CYP76 low borderline CYP76__00023__sp_S4UX02_CYPH1_SALMI
Bca_GomB02g52700.mRNA1 Terpenoid CYP76 low borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Bca_GomB02g53340.mRNA1 Terpenoid CYP76 medium borderline CYP76__00023__sp_S4UX02_CYPH1_SALMI
Bca_GomB02g60920.mRNA1 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Bca_GomB02g67470.mRNA1 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomB02g67480.mRNA1 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Bca_GomB02g67500.mRNA1 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomB02g67510.mRNA1 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomB02g67520.mRNA1 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Bca_GomB02g67770.mRNA1 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Bca_GomB02g67780.mRNA1 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomB02g70430.mRNA1 Terpenoid CYP76 medium borderline CYP76__00002__sp_A0A0C5QRZ2_C76H2_SALFT
Bca_GomB02g74100.mRNA1 Terpenoid CYP76 medium borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
Bca_GomB02g77120.mRNA1 Terpenoid CYP76 medium borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
Bca_GomB02g82930.mRNA1 Terpenoid CYP76 low borderline CYP76__00017__sp_Q14T82_C76B9_PETHY
Bca_GomB02g85890.mRNA1 Terpenoid CYP76 medium pass CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
Bca_GomB02g86260.mRNA1 Terpenoid CYP76 medium pass CYP76__00013__sp_D1MI46_C76BA_SWEMU
Bca_GomB02g96880.mRNA1 Terpenoid CYP76 medium pass CYP76__00003__sp_A0A0S1TPC7_C76K6_SALPM
Bca_GomB02g97330.mRNA1 Terpenoid CYP76 medium borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Bca_GomB02g97890.mRNA1 Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Bca_GomB02g97900.mRNA1 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomB02g97910.mRNA1 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomB02g98390.mRNA1 Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Bca_GomB02g99050.mRNA1 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Bca_GomB02g99570.mRNA1 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Bca_GomB03g08080.mRNA1 Terpenoid CYP76 low borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Bca_GomB03g08120.mRNA1 Terpenoid CYP76 low borderline CYP76__00002__sp_A0A0C5QRZ2_C76H2_SALFT
Bca_GomB03g08450.mRNA1 Terpenoid CYP76 low borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Bca_GomB03g08490.mRNA1 Terpenoid CYP76 low borderline CYP76__00002__sp_A0A0C5QRZ2_C76H2_SALFT
Bca_GomB03g09340.mRNA1 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomB03g09350.mRNA1 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomB03g09390.mRNA1 Terpenoid CYP76 low borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Bca_GomB03g13170.mRNA1 Terpenoid CYP76 low borderline CYP76__00018__sp_Q69X58_C76M7_ORYSJ
Bca_GomB03g13640.mRNA1 Terpenoid CYP76 low borderline CYP76__00018__sp_Q69X58_C76M7_ORYSJ
Bca_GomB03g15390.mRNA1 Terpenoid CYP76 medium borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Bca_GomB03g17060.mRNA1 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Bca_GomB03g17100.mRNA1 Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Bca_GomB03g17380.mRNA1 Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Bca_GomB03g21070.mRNA1 Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Bca_GomB03g29280.mRNA1 Terpenoid CYP76 medium pass CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
Bca_GomB03g31200.mRNA1 Terpenoid CYP76 low borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
Bca_GomB03g49760.mRNA1 Terpenoid CYP76 low borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Bca_GomB03g49990.mRNA1 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomB03g50050.mRNA1 Terpenoid CYP76 medium pass CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
Bca_GomB03g53080.mRNA1 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomB03g65260.mRNA1 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO