PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Bca_GomB03g88030.mRNA1 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomB03g88040.mRNA1 Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Bca_GomB03g88790.mRNA1 Terpenoid CYP76 low borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Bca_GomB03g97250.mRNA1 Terpenoid CYP76 low borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Bca_GomB04g00560.mRNA1 Terpenoid CYP76 low borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Bca_GomB04g01010.mRNA1 Terpenoid CYP76 medium borderline CYP76__00014__sp_I3PFJ5_C76AD_BETVU
Bca_GomB04g02250.mRNA1 Terpenoid CYP76 medium pass CYP76__00023__sp_S4UX02_CYPH1_SALMI
Bca_GomB04g07780.mRNA1 Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Bca_GomB04g08420.mRNA1 Terpenoid CYP76 medium borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Bca_GomB04g09710.mRNA1 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomB04g10240.mRNA1 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Bca_GomB04g10290.mRNA1 Terpenoid CYP76 low borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Bca_GomB04g10340.mRNA1 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Bca_GomB04g14510.mRNA1 Terpenoid CYP76 medium borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
Bca_GomB04g17910.mRNA1 Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Bca_GomB04g18380.mRNA1 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Bca_GomB04g18410.mRNA1 Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Bca_GomB04g18420.mRNA1 Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Bca_GomB04g20500.mRNA1 Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Bca_GomB04g20530.mRNA1 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomB04g20550.mRNA1 Terpenoid CYP76 medium borderline CYP76__00014__sp_I3PFJ5_C76AD_BETVU
Bca_GomB04g20560.mRNA1 Terpenoid CYP76 medium borderline CYP76__00014__sp_I3PFJ5_C76AD_BETVU
Bca_GomB04g20650.mRNA1 Terpenoid CYP76 low borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Bca_GomB04g20800.mRNA1 Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Bca_GomB04g26610.mRNA1 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Bca_GomB04g26620.mRNA1 Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Bca_GomB04g26630.mRNA1 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Bca_GomB04g27840.mRNA1 Terpenoid CYP76 medium borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
Bca_GomB04g27850.mRNA2 Terpenoid CYP76 low borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Bca_GomB04g28460.mRNA1 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Bca_GomB04g28480.mRNA1 Terpenoid CYP76 low borderline CYP76__00008__sp_A0A1D8QMG4_C76K8_ROSOF
Bca_GomB04g34380.mRNA1 Terpenoid CYP76 low borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Bca_GomB04g35930.mRNA1 Terpenoid CYP76 medium borderline CYP76__00023__sp_S4UX02_CYPH1_SALMI
Bca_GomB04g42220.mRNA1 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Bca_GomB04g44320.mRNA1 Terpenoid CYP76 low borderline CYP76__00017__sp_Q14T82_C76B9_PETHY
Bca_GomB04g44730.mRNA1 Terpenoid CYP76 low borderline CYP76__00017__sp_Q14T82_C76B9_PETHY
Bca_GomB04g44890.mRNA1 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomB04g45270.mRNA1 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomB04g51930.mRNA1 Terpenoid CYP76 low borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Bca_GomB04g60270.mRNA1 Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Bca_GomB04g68620.mRNA1 Terpenoid CYP76 low borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Bca_GomB04g74560.mRNA1 Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Bca_GomB04g74570.mRNA1 Terpenoid CYP76 medium pass CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Bca_GomB05g01150.mRNA1 Terpenoid CYP76 low borderline CYP76__00021__sp_Q6Z5I7_C76M6_ORYSJ
Bca_GomB05g02330.mRNA1 Terpenoid CYP76 medium pass CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Bca_GomB05g06330.mRNA1 Terpenoid CYP76 medium pass CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Bca_GomB05g08580.mRNA1 Terpenoid CYP76 medium borderline CYP76__00014__sp_I3PFJ5_C76AD_BETVU
Bca_GomB05g09930.mRNA1 Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Bca_GomB05g10040.mRNA1 Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Bca_GomB05g10220.mRNA1 Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU