PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Bca_GomC02g28090.mRNA1 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Bca_GomC02g36160.mRNA1 Terpenoid CYP76 low borderline CYP76__00018__sp_Q69X58_C76M7_ORYSJ
Bca_GomC02g36310.mRNA1 Terpenoid CYP76 low borderline CYP76__00008__sp_A0A1D8QMG4_C76K8_ROSOF
Bca_GomC02g36320.mRNA1 Terpenoid CYP76 medium pass CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Bca_GomC02g38690.mRNA1 Terpenoid CYP76 medium borderline CYP76__00008__sp_A0A1D8QMG4_C76K8_ROSOF
Bca_GomC02g39840.mRNA1 Terpenoid CYP76 medium borderline CYP76__00023__sp_S4UX02_CYPH1_SALMI
Bca_GomC02g40760.mRNA1 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Bca_GomC02g40780.mRNA1 Terpenoid CYP76 low borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Bca_GomC02g40930.mRNA1 Terpenoid CYP76 medium pass CYP76__00005__sp_A0A125QZE2_C76K1_SALMI
Bca_GomC02g41690.mRNA1 Terpenoid CYP76 low borderline CYP76__00024__sp_W0FKI0_DOX1_PERHD
Bca_GomC02g49440.mRNA1 Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Bca_GomC02g49890.mRNA1 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomC02g49900.mRNA1 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomC02g49950.mRNA1 Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Bca_GomC02g50780.mRNA1 Terpenoid CYP76 medium pass CYP76__00017__sp_Q14T82_C76B9_PETHY
Bca_GomC02g52150.mRNA1 Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Bca_GomC02g52160.mRNA1 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Bca_GomC02g53110.mRNA1 Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Bca_GomC02g53960.mRNA1 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Bca_GomC02g56420.mRNA1 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Bca_GomC02g56520.mRNA1 Terpenoid CYP76 medium pass CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Bca_GomC03g05910.mRNA1 Terpenoid CYP76 low borderline CYP76__00024__sp_W0FKI0_DOX1_PERHD
Bca_GomC03g06370.mRNA1 Terpenoid CYP76 low borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Bca_GomC03g09500.mRNA3 Terpenoid CYP76 medium pass CYP76__00006__sp_A0A1D8QMD1_C76K6_SALFT
Bca_GomC03g09730.mRNA2 Terpenoid CYP76 medium pass CYP76__00006__sp_A0A1D8QMD1_C76K6_SALFT
Bca_GomC03g10490.mRNA1 Terpenoid CYP76 low borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Bca_GomC03g10550.mRNA1 Terpenoid CYP76 low borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Bca_GomC03g21450.mRNA1 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomC03g21460.mRNA1 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Bca_GomC03g23580.mRNA1 Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Bca_GomC03g24290.mRNA1 Terpenoid CYP76 low borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
Bca_GomC03g25840.mRNA1 Terpenoid CYP76 medium pass CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Bca_GomC03g25850.mRNA1 Terpenoid CYP76 medium pass CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
Bca_GomC03g25960.mRNA1 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Bca_GomC03g32000.mRNA1 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Bca_GomC03g36530.mRNA1 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomC03g38290.mRNA1 Terpenoid CYP76 low borderline CYP76__00020__sp_Q6YTF5_C76M5_ORYSJ
Bca_GomC03g38490.mRNA1 Terpenoid CYP76 medium pass CYP76__00013__sp_D1MI46_C76BA_SWEMU
Bca_GomC03g41530.mRNA1 Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Bca_GomC03g41540.mRNA1 Terpenoid CYP76 medium borderline CYP76__00008__sp_A0A1D8QMG4_C76K8_ROSOF
Bca_GomC03g42550.mRNA1 Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Bca_GomC03g44950.mRNA1 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomC03g46810.mRNA1 Terpenoid CYP76 medium pass CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
Bca_GomC03g54390.mRNA1 Terpenoid CYP76 low borderline CYP76__00021__sp_Q6Z5I7_C76M6_ORYSJ
Bca_GomC03g54410.mRNA1 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Bca_GomC03g54420.mRNA1 Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Bca_GomC03g58360.mRNA1 Terpenoid CYP76 low borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Bca_GomC03g59830.mRNA1 Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Bca_GomC03g59840.mRNA1 Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Bca_GomC03g62280.mRNA1 Terpenoid CYP76 medium borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI