PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP90D1
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Gene Pathway Family Confidence Status
Bca_GomB01g25190.mRNA1 Steroid CYP90D1 low borderline
Bca_GomB01g43080.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomB01g49430.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomB01g49580.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomB02g11170.mRNA1 Steroid CYP90D1 low borderline
Bca_GomB02g51340.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomB02g51390.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomB02g60870.mRNA1 Steroid CYP90D1 low borderline
Bca_GomB02g60880.mRNA1 Steroid CYP90D1 low borderline
Bca_GomB02g61470.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomB02g68740.mRNA1 Steroid CYP90D1 low borderline
Bca_GomB02g68750.mRNA1 Steroid CYP90D1 low borderline
Bca_GomB02g68760.mRNA1 Steroid CYP90D1 low borderline
Bca_GomB02g69080.mRNA1 Steroid CYP90D1 low borderline
Bca_GomB02g69090.mRNA1 Steroid CYP90D1 low borderline
Bca_GomB02g69360.mRNA1 Steroid CYP90D1 low borderline
Bca_GomB02g69370.mRNA1 Steroid CYP90D1 low borderline
Bca_GomB02g69380.mRNA1 Steroid CYP90D1 low borderline
Bca_GomB02g70430.mRNA1 Steroid CYP90D1 low borderline
Bca_GomB02g74540.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomB02g82480.mRNA1 Steroid CYP90D1 low borderline
Bca_GomB02g82490.mRNA1 Steroid CYP90D1 low borderline
Bca_GomB02g82930.mRNA1 Steroid CYP90D1 low borderline
Bca_GomB03g09340.mRNA1 Steroid CYP90D1 low borderline
Bca_GomB03g09390.mRNA1 Steroid CYP90D1 low borderline
Bca_GomB03g13170.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomB03g13640.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomB03g15390.mRNA1 Steroid CYP90D1 low borderline
Bca_GomB03g17060.mRNA1 Steroid CYP90D1 low borderline
Bca_GomB03g17100.mRNA1 Steroid CYP90D1 low borderline
Bca_GomB03g17380.mRNA1 Steroid CYP90D1 low borderline
Bca_GomB04g28440.mRNA1 Steroid CYP90D1 low borderline
Bca_GomB04g31720.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomB05g08940.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomB05g31100.mRNA1 Steroid CYP90D1 low borderline
Bca_GomB05g32290.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomB05g44740.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomB05g81210.mRNA1 Steroid CYP90D1 low borderline
Bca_GomB06g17070.mRNA1 Steroid CYP90D1 low borderline
Bca_GomB06g17490.mRNA1 Steroid CYP90D1 low borderline
Bca_GomB06g52260.mRNA1 Steroid CYP90D1 low borderline
Bca_GomB06g69200.mRNA1 Steroid CYP90D1 low borderline
Bca_GomB06g76250.mRNA1 Steroid CYP90D1 low borderline
Bca_GomB06g86670.mRNA2 Steroid CYP90D1 low borderline
Bca_GomB07g18540.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomB07g41490.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomB07g49020.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomB07g60890.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomB07g67740.mRNA1 Steroid CYP90D1 low borderline
Bca_GomB07g80020.mRNA1 Steroid CYP90D1 medium borderline