PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP90D1
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Gene Pathway Family Confidence Status
Bca_GomB08g03470.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomB08g03690.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomB08g03970.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomB08g03980.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomC01g00940.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomC01g17470.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomC01g35550.mRNA1 Steroid CYP90D1 low borderline
Bca_GomC01g49470.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomC02g04000.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomC02g04480.mRNA1 Steroid CYP90D1 low borderline
Bca_GomC02g56750.mRNA1 Steroid CYP90D1 low borderline
Bca_GomC03g10280.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomC03g10490.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomC03g39680.mRNA1 Steroid CYP90D1 low borderline
Bca_GomC03g53920.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomC03g59830.mRNA1 Steroid CYP90D1 low borderline
Bca_GomC03g78930.mRNA1 Steroid CYP90D1 low borderline
Bca_GomC03g88360.mRNA1 Steroid CYP90D1 low borderline
Bca_GomC03g90110.mRNA1 Steroid CYP90D1 low borderline
Bca_GomC04g65100.mRNA1 Steroid CYP90D1 low borderline
Bca_GomC05g15790.mRNA1 Steroid CYP90D1 low borderline
Bca_GomC05g46330.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomC05g51130.mRNA1 Steroid CYP90D1 low borderline
Bca_GomC05g52440.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomC05g52470.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomC05g52590.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomC06g27050.mRNA1 Steroid CYP90D1 low borderline
Bca_GomC07g29190.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomC07g36870.mRNA1 Steroid CYP90D1 low borderline
Bca_GomC07g36900.mRNA1 Steroid CYP90D1 low borderline
Bca_GomC07g36970.mRNA1 Steroid CYP90D1 low borderline
Bca_GomC07g36980.mRNA1 Steroid CYP90D1 low borderline
Bca_GomC07g36990.mRNA1 Steroid CYP90D1 low borderline
Bca_GomC07g37120.mRNA1 Steroid CYP90D1 low borderline
Bca_GomC07g37130.mRNA1 Steroid CYP90D1 low borderline
Bca_GomC07g37140.mRNA1 Steroid CYP90D1 low borderline
Bca_GomC07g41850.mRNA1 Steroid CYP90D1 low borderline
Bca_GomC07g42430.mRNA1 Steroid CYP90D1 low borderline
Bca_GomC08g02440.mRNA1 Steroid CYP90D1 low borderline
Bca_GomC08g02460.mRNA1 Steroid CYP90D1 low borderline
Bca_GomC08g11430.mRNA1 Steroid CYP90D1 low borderline
Bca_GomC08g15310.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomC08g49520.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomC09g20790.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomC09g50380.mRNA1 Steroid CYP90D1 medium borderline
Bca_GomC09g60110.mRNA1 Steroid CYP90D1 medium borderline