PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

/

Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
Reset
Gene Pathway Family Confidence Status
Bca_GomB02g67480.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB02g67520.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB02g67800.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB02g67810.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB02g67830.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB02g67840.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB02g67850.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB02g71090.mRNA1 Steroid DWF4/CYP90B1 medium borderline
Bca_GomB02g77960.mRNA1 Steroid DWF4/CYP90B1 medium borderline
Bca_GomB02g77970.mRNA1 Steroid DWF4/CYP90B1 medium borderline
Bca_GomB02g80410.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB02g80640.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB02g82470.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB02g83510.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB02g93720.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB02g97890.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB02g97900.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB02g97910.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB02g98390.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB02g98790.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB03g09360.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB03g09370.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB03g09380.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB03g20620.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB03g21070.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB03g21380.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB03g52220.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB03g59380.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB03g59470.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB03g65970.mRNA1 Steroid DWF4/CYP90B1 medium borderline
Bca_GomB03g88030.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB04g00510.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB04g00560.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB04g08420.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB04g09710.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB04g10290.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB04g12160.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB04g14630.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB04g14660.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB04g15370.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB04g15420.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB04g17910.mRNA1 Steroid DWF4/CYP90B1 medium borderline
Bca_GomB04g18380.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB04g18410.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB04g18420.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB04g20510.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB04g20520.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB04g20530.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB04g20540.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB04g23020.mRNA1 Steroid DWF4/CYP90B1 low borderline