PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
Bca_GomB04g27780.mRNA2 Steroid DWF4/CYP90B1 low borderline
Bca_GomB04g27790.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB04g27810.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB04g28430.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB04g28460.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB04g28490.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB04g34370.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB04g34620.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB04g42220.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB04g44320.mRNA1 Steroid DWF4/CYP90B1 medium borderline
Bca_GomB04g44540.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB04g44730.mRNA1 Steroid DWF4/CYP90B1 medium borderline
Bca_GomB04g60270.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB04g69240.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB04g69250.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB04g74570.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB04g74590.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB05g01150.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB05g06330.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB05g08580.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB05g09930.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB05g10040.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB05g10220.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB05g10620.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB05g11890.mRNA2 Steroid DWF4/CYP90B1 low borderline
Bca_GomB05g11910.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB05g11920.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB05g11950.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB05g12190.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB05g12200.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB05g12220.mRNA2 Steroid DWF4/CYP90B1 low borderline
Bca_GomB05g12240.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB05g12250.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB05g17700.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB05g35270.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB05g36090.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB05g38910.mRNA1 Steroid DWF4/CYP90B1 medium borderline
Bca_GomB05g52850.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB05g62670.mRNA2 Steroid DWF4/CYP90B1 medium borderline
Bca_GomB05g64240.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB05g76090.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB06g09040.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB06g13610.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB06g17040.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB06g31110.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB06g31120.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB06g31170.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB06g69190.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB06g69210.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB07g17790.mRNA1 Steroid DWF4/CYP90B1 low borderline