PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Protein/Isoform Record Pathway Family Confidence Status
Bca_GomC04g46770.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC04g55690.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC04g56480.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC04g62240.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC04g65080.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC04g65090.mRNA2 Steroid DWF4/CYP90B1 medium borderline
Bca_GomC04g66710.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC05g01800.mRNA1 Steroid DWF4/CYP90B1 medium borderline
Bca_GomC05g13210.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC05g13250.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC05g13990.mRNA1 Steroid DWF4/CYP90B1 medium borderline
Bca_GomC05g50930.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC05g50940.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC05g50950.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC05g50960.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC05g50980.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC05g51150.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC05g56270.mRNA1 Steroid DWF4/CYP90B1 medium borderline
Bca_GomC05g59550.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC06g23050.mRNA2 Steroid DWF4/CYP90B1 low borderline
Bca_GomC06g28200.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC06g39520.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC07g08910.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC07g15380.mRNA1 Steroid DWF4/CYP90B1 medium borderline
Bca_GomC07g16690.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC07g35760.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC07g35770.mRNA1 Steroid DWF4/CYP90B1 medium borderline
Bca_GomC07g35800.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC07g35820.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC07g35830.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC07g37060.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC07g37190.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC07g38140.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC07g38960.mRNA1 Steroid DWF4/CYP90B1 medium borderline
Bca_GomC07g41120.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC07g41130.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC07g47380.mRNA2 Steroid DWF4/CYP90B1 medium borderline
Bca_GomC07g58780.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC07g60310.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC07g63170.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC07g63430.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC07g63870.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC07g63880.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC07g69150.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC07g71700.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC07g71710.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC08g13770.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC08g24710.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC08g24720.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC08g24740.mRNA1 Steroid DWF4/CYP90B1 low borderline