PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3'5'H/CYP75A
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Gene Pathway Family Confidence Status
Bca_GomB01g02180.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB01g23470.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB01g72530.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB01g76560.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB01g77410.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB01g77440.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB02g07800.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB02g14600.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB02g14880.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB02g44330.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB02g52490.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB02g52700.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB02g77970.mRNA1 Flavonoid F3'5'H/CYP75A low borderline
Bca_GomB03g05580.mRNA1 Flavonoid F3'5'H/CYP75A low borderline
Bca_GomB03g08080.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB03g08450.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB03g49990.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB03g97250.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB04g14510.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB04g27810.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB04g28460.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB04g34370.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB04g34380.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB04g34620.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB04g44320.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB04g44730.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB04g74560.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB05g35610.mRNA1 Flavonoid F3'5'H/CYP75A low borderline
Bca_GomB05g38250.mRNA1 Flavonoid F3'5'H/CYP75A low borderline
Bca_GomB05g38910.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB06g23500.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB06g33700.mRNA1 Flavonoid F3'5'H/CYP75A low borderline
Bca_GomB06g53780.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB06g54070.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB06g54920.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB06g75880.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB07g30350.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB07g30360.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB07g60890.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB08g03690.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomC01g04030.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomC02g04000.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomC02g08830.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomC02g36320.mRNA1 Flavonoid F3'5'H/CYP75A low borderline
Bca_GomC02g53110.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomC02g56420.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomC03g02860.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomC03g02870.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomC03g09500.mRNA3 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomC03g09730.mRNA2 Flavonoid F3'5'H/CYP75A medium borderline