PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Bca_GomB05g44790.mRNA1 Flavonoid F3H medium borderline
Bca_GomB05g54560.mRNA1 Flavonoid F3H low borderline
Bca_GomB05g55880.mRNA1 Flavonoid F3H medium borderline
Bca_GomB05g72370.mRNA1 Flavonoid F3H medium borderline
Bca_GomB05g72460.mRNA1 Flavonoid F3H medium borderline
Bca_GomB05g73200.mRNA1 Flavonoid F3H low borderline
Bca_GomB05g73230.mRNA1 Flavonoid F3H low borderline
Bca_GomB05g85930.mRNA1 Flavonoid F3H medium borderline
Bca_GomB05g86300.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g03390.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g03870.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g03890.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g03930.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g05660.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g05670.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g05680.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g05690.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g05780.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g07020.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g09130.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g16000.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g21370.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g22010.mRNA1 Flavonoid F3H low borderline
Bca_GomB06g23760.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g25240.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g25510.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g27290.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g27320.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g39450.mRNA1 Flavonoid F3H low borderline
Bca_GomB06g51290.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g52050.mRNA1 Flavonoid F3H low borderline
Bca_GomB06g52080.mRNA1 Flavonoid F3H low borderline
Bca_GomB06g54190.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g55550.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g57630.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g57650.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g57670.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g58220.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g59120.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g60020.mRNA1 Flavonoid F3H low borderline
Bca_GomB06g60120.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g60870.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g60890.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g60980.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g60990.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g62170.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g62180.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g63500.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g76640.mRNA1 Flavonoid F3H medium borderline
Bca_GomB06g79490.mRNA1 Flavonoid F3H medium borderline