PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Bca_GomB08g31980.mRNA1 Flavonoid F3H low borderline
Bca_GomB08g32010.mRNA1 Flavonoid F3H medium borderline
Bca_GomB08g48100.mRNA1 Flavonoid F3H medium borderline
Bca_GomB08g48130.mRNA1 Flavonoid F3H medium borderline
Bca_GomB08g52530.mRNA1 Flavonoid F3H low borderline
Bca_GomB08g59510.mRNA1 Flavonoid F3H low borderline
Bca_GomB08g59560.mRNA1 Flavonoid F3H low borderline
Bca_GomB08g66470.mRNA1 Flavonoid F3H medium borderline
Bca_GomB08g76920.mRNA1 Flavonoid F3H medium borderline
Bca_GomB08g76990.mRNA1 Flavonoid F3H medium borderline
Bca_GomB08g79670.mRNA1 Flavonoid F3H low borderline
Bca_GomB08g80950.mRNA1 Flavonoid F3H medium borderline
Bca_GomB08g86620.mRNA1 Flavonoid F3H medium borderline
Bca_GomB08g93680.mRNA1 Flavonoid F3H low borderline
Bca_GomB08g93740.mRNA1 Flavonoid F3H low borderline
Bca_GomB08g93870.mRNA2 Flavonoid F3H low borderline
Bca_GomB08g94440.mRNA1 Flavonoid F3H medium borderline
Bca_GomC01g19370.mRNA1 Flavonoid F3H medium borderline
Bca_GomC01g21220.mRNA1 Flavonoid F3H medium borderline
Bca_GomC01g24680.mRNA1 Flavonoid F3H medium borderline
Bca_GomC01g24690.mRNA1 Flavonoid F3H medium borderline
Bca_GomC01g24810.mRNA1 Flavonoid F3H medium borderline
Bca_GomC01g29530.mRNA1 Flavonoid F3H low borderline
Bca_GomC01g34000.mRNA1 Flavonoid F3H low borderline
Bca_GomC01g37930.mRNA1 Flavonoid F3H medium borderline
Bca_GomC01g42620.mRNA1 Flavonoid F3H medium borderline
Bca_GomC01g47550.mRNA1 Flavonoid F3H low borderline
Bca_GomC01g47600.mRNA1 Flavonoid F3H low borderline
Bca_GomC01g49590.mRNA1 Flavonoid F3H medium borderline
Bca_GomC01g50480.mRNA1 Flavonoid F3H medium borderline
Bca_GomC01g51810.mRNA1 Flavonoid F3H medium borderline
Bca_GomC01g55650.mRNA1 Flavonoid F3H medium borderline
Bca_GomC02g03910.mRNA1 Flavonoid F3H medium borderline
Bca_GomC02g03960.mRNA1 Flavonoid F3H medium borderline
Bca_GomC02g03990.mRNA1 Flavonoid F3H medium borderline
Bca_GomC02g04550.mRNA1 Flavonoid F3H medium borderline
Bca_GomC02g04720.mRNA1 Flavonoid F3H medium borderline
Bca_GomC02g07150.mRNA1 Flavonoid F3H medium borderline
Bca_GomC02g29730.mRNA1 Flavonoid F3H low borderline
Bca_GomC02g33960.mRNA1 Flavonoid F3H medium borderline
Bca_GomC02g35740.mRNA1 Flavonoid F3H medium borderline
Bca_GomC02g35750.mRNA1 Flavonoid F3H medium borderline
Bca_GomC02g35770.mRNA1 Flavonoid F3H low borderline
Bca_GomC02g37940.mRNA1 Flavonoid F3H low borderline
Bca_GomC02g37950.mRNA1 Flavonoid F3H low borderline
Bca_GomC02g46110.mRNA1 Flavonoid F3H low borderline
Bca_GomC02g56780.mRNA1 Flavonoid F3H medium borderline
Bca_GomC02g56830.mRNA1 Flavonoid F3H medium pass
Bca_GomC02g56840.mRNA1 Flavonoid F3H medium borderline
Bca_GomC02g57410.mRNA1 Flavonoid F3H medium borderline