PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3'H/CYP75B
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Gene Pathway Family Confidence Status
Bca_GomB01g00770.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB01g07490.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB01g11020.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB01g30050.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB01g48060.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB01g48110.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB01g48130.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB01g53780.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g01110.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g07310.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g08010.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g08580.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g19570.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB02g47190.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g48350.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g51130.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g53340.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g67480.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g67520.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g67770.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g67830.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g67840.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g69080.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB02g74100.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g76820.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g77120.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g82310.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB02g83380.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB02g96880.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g98390.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g98790.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB02g98800.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB02g99050.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB03g09340.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB03g09390.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB03g17100.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB03g17380.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB03g21070.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB03g21380.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB03g31200.mRNA1 Flavonoid F3'H/CYP75B medium pass
Bca_GomB03g50050.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB03g64650.mRNA2 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB03g65260.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB03g65980.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB03g67190.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB04g00520.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB04g00560.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB04g01010.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB04g08420.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB04g10240.mRNA1 Flavonoid F3'H/CYP75B medium borderline