PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3'H/CYP75B
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Gene Pathway Family Confidence Status
Bca_GomB04g10290.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB04g15420.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB04g18410.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB04g20500.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB04g20510.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB04g20530.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB04g20550.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB04g20610.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB04g26620.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB04g27780.mRNA2 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB04g27790.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB04g28430.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB04g28440.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB04g35930.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB04g42220.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB04g44540.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB04g69240.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB04g69250.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB05g01150.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB05g02330.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB05g09930.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB05g10040.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB05g10220.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB05g10620.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB05g10630.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB05g12250.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB05g29130.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB05g31100.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB05g35270.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB05g36090.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB05g64060.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB05g64240.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB05g64320.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB05g76090.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB05g84460.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB06g31170.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB06g38380.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB06g38410.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB06g38660.mRNA2 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB06g51700.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB06g54060.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB06g59580.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB06g69200.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB06g70000.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB06g70720.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB06g70810.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB06g71760.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB06g75220.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB06g76260.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB06g86670.mRNA2 Flavonoid F3'H/CYP75B medium borderline