PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3'H/CYP75B
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Gene Pathway Family Confidence Status
Bca_GomB07g05440.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB07g17790.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB07g17880.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB07g19280.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB07g26720.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB07g27810.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB07g39340.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB07g52120.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB07g52130.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB07g67740.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB08g04200.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB08g20210.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB08g20220.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB08g23450.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB08g25630.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB08g36950.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB08g52310.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB08g52750.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB08g77290.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB08g84240.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB08g84270.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB08g91310.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB08g91370.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC01g02320.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC01g02690.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC01g02910.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC01g03690.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC01g04070.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC01g04130.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC01g20790.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC01g32760.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC01g40130.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC01g48600.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC01g48620.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC01g48640.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC01g48650.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC02g30630.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC02g36160.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC02g39840.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC02g40780.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC02g49890.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC02g49940.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC02g52150.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC02g52160.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC03g02880.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC03g05920.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC03g24290.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC03g25960.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC03g38490.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC03g39680.mRNA1 Flavonoid F3'H/CYP75B medium borderline