PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3'H/CYP75B
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Gene Pathway Family Confidence Status
Bca_GomC03g41530.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC03g46810.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC03g50570.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC03g50580.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC03g54420.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC03g62280.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC03g68670.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC03g74980.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC03g81420.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC03g86640.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC03g90110.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC04g37730.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC04g43030.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC04g56480.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC04g62050.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC04g65090.mRNA2 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC04g65100.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC05g02890.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC05g13210.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC05g13240.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC05g15220.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC05g15790.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC05g18860.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC05g50970.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC05g56270.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC06g23050.mRNA2 Flavonoid F3'H/CYP75B low borderline
Bca_GomC06g25610.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC06g51150.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC06g53150.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC07g16690.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC07g35780.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC07g35830.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC07g36970.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC07g37060.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC07g42590.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC07g42790.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC07g51610.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC07g62910.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC07g63170.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC07g63430.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC07g71710.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC08g11430.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC08g24670.mRNA2 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC08g24710.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC08g24750.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC08g24760.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC08g24780.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC08g31610.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC08g35190.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC08g35200.mRNA1 Flavonoid F3'H/CYP75B medium borderline