PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: FNS
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Gene Pathway Family Confidence Status
Bca_GomB07g64530.mRNA1 Flavonoid FNS medium borderline
Bca_GomB07g73660.mRNA1 Flavonoid FNS medium borderline
Bca_GomB08g20320.mRNA1 Flavonoid FNS low borderline
Bca_GomB08g44660.mRNA1 Flavonoid FNS medium borderline
Bca_GomC01g18320.mRNA1 Flavonoid FNS medium borderline
Bca_GomC01g18890.mRNA1 Flavonoid FNS medium borderline
Bca_GomC01g49620.mRNA1 Flavonoid FNS medium borderline
Bca_GomC01g49740.mRNA1 Flavonoid FNS medium borderline
Bca_GomC01g49800.mRNA1 Flavonoid FNS medium borderline
Bca_GomC01g58500.mRNA1 Flavonoid FNS medium borderline
Bca_GomC02g15430.mRNA1 Flavonoid FNS medium borderline
Bca_GomC02g19290.mRNA1 Flavonoid FNS low borderline
Bca_GomC02g23860.mRNA1 Flavonoid FNS medium borderline
Bca_GomC02g27610.mRNA1 Flavonoid FNS low borderline
Bca_GomC02g49950.mRNA1 Flavonoid FNS medium borderline
Bca_GomC02g56750.mRNA1 Flavonoid FNS medium borderline
Bca_GomC03g06370.mRNA1 Flavonoid FNS medium borderline
Bca_GomC03g10550.mRNA1 Flavonoid FNS medium borderline
Bca_GomC03g21580.mRNA1 Flavonoid FNS low borderline
Bca_GomC03g24320.mRNA1 Flavonoid FNS medium borderline
Bca_GomC03g25850.mRNA1 Flavonoid FNS medium borderline
Bca_GomC03g36530.mRNA1 Flavonoid FNS medium borderline
Bca_GomC03g38290.mRNA1 Flavonoid FNS medium borderline
Bca_GomC03g44950.mRNA1 Flavonoid FNS medium borderline
Bca_GomC03g54380.mRNA1 Flavonoid FNS medium borderline
Bca_GomC03g54400.mRNA1 Flavonoid FNS medium borderline
Bca_GomC03g54410.mRNA1 Flavonoid FNS medium borderline
Bca_GomC03g59830.mRNA1 Flavonoid FNS medium borderline
Bca_GomC03g59840.mRNA1 Flavonoid FNS medium borderline
Bca_GomC03g82050.mRNA1 Flavonoid FNS medium borderline
Bca_GomC03g90930.mRNA1 Flavonoid FNS low borderline
Bca_GomC04g02120.mRNA1 Flavonoid FNS medium borderline
Bca_GomC04g02410.mRNA1 Flavonoid FNS medium borderline
Bca_GomC04g04700.mRNA1 Flavonoid FNS medium borderline
Bca_GomC04g65670.mRNA1 Flavonoid FNS medium borderline
Bca_GomC05g12770.mRNA1 Flavonoid FNS medium borderline
Bca_GomC05g37490.mRNA1 Flavonoid FNS medium borderline
Bca_GomC05g45200.mRNA1 Flavonoid FNS medium borderline
Bca_GomC05g51140.mRNA1 Flavonoid FNS medium borderline
Bca_GomC05g59560.mRNA1 Flavonoid FNS medium borderline
Bca_GomC05g60280.mRNA1 Flavonoid FNS low borderline
Bca_GomC06g00330.mRNA1 Flavonoid FNS medium borderline
Bca_GomC06g05720.mRNA1 Flavonoid FNS low borderline
Bca_GomC07g35290.mRNA1 Flavonoid FNS medium borderline
Bca_GomC07g35840.mRNA1 Flavonoid FNS low borderline
Bca_GomC07g37070.mRNA1 Flavonoid FNS medium borderline
Bca_GomC07g37090.mRNA1 Flavonoid FNS medium borderline
Bca_GomC07g37230.mRNA1 Flavonoid FNS medium borderline
Bca_GomC07g41140.mRNA1 Flavonoid FNS medium borderline
Bca_GomC07g47800.mRNA1 Flavonoid FNS low borderline