PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
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Gene Pathway Family Confidence Status
Bca_GomB06g27310.mRNA1 Alkaloid H6H medium borderline
Bca_GomB06g42260.mRNA1 Alkaloid H6H low borderline
Bca_GomB06g47180.mRNA1 Alkaloid H6H low borderline
Bca_GomB06g52050.mRNA1 Alkaloid H6H low borderline
Bca_GomB06g52080.mRNA1 Alkaloid H6H low borderline
Bca_GomB06g54180.mRNA1 Alkaloid H6H low borderline
Bca_GomB06g57640.mRNA1 Alkaloid H6H medium borderline
Bca_GomB06g57670.mRNA1 Alkaloid H6H medium borderline
Bca_GomB06g59120.mRNA1 Alkaloid H6H medium borderline
Bca_GomB06g60870.mRNA1 Alkaloid H6H medium pass
Bca_GomB06g60880.mRNA1 Alkaloid H6H medium pass
Bca_GomB06g60890.mRNA1 Alkaloid H6H medium pass
Bca_GomB06g60980.mRNA1 Alkaloid H6H medium pass
Bca_GomB06g60990.mRNA1 Alkaloid H6H medium pass
Bca_GomB06g63500.mRNA1 Alkaloid H6H medium borderline
Bca_GomB06g65780.mRNA1 Alkaloid H6H low borderline
Bca_GomB06g74270.mRNA1 Alkaloid H6H low borderline
Bca_GomB06g79490.mRNA1 Alkaloid H6H medium borderline
Bca_GomB06g88330.mRNA1 Alkaloid H6H low borderline
Bca_GomB07g03380.mRNA1 Alkaloid H6H low borderline
Bca_GomB07g03990.mRNA1 Alkaloid H6H medium pass
Bca_GomB07g16040.mRNA1 Alkaloid H6H low borderline
Bca_GomB07g17530.mRNA1 Alkaloid H6H low borderline
Bca_GomB07g17600.mRNA1 Alkaloid H6H low borderline
Bca_GomB07g19930.mRNA1 Alkaloid H6H low borderline
Bca_GomB07g19950.mRNA1 Alkaloid H6H low borderline
Bca_GomB07g25420.mRNA1 Alkaloid H6H medium borderline
Bca_GomB07g28430.mRNA1 Alkaloid H6H low borderline
Bca_GomB07g28600.mRNA1 Alkaloid H6H low borderline
Bca_GomB07g34360.mRNA1 Alkaloid H6H medium pass
Bca_GomB07g34380.mRNA1 Alkaloid H6H medium pass
Bca_GomB07g34390.mRNA1 Alkaloid H6H medium borderline
Bca_GomB07g34400.mRNA1 Alkaloid H6H medium borderline
Bca_GomB07g34770.mRNA1 Alkaloid H6H low borderline
Bca_GomB07g34780.mRNA1 Alkaloid H6H medium borderline
Bca_GomB07g54410.mRNA1 Alkaloid H6H low borderline
Bca_GomB07g76340.mRNA1 Alkaloid H6H low borderline
Bca_GomB08g00110.mRNA1 Alkaloid H6H medium borderline
Bca_GomB08g06450.mRNA1 Alkaloid H6H low borderline
Bca_GomB08g29790.mRNA1 Alkaloid H6H medium borderline
Bca_GomB08g31660.mRNA1 Alkaloid H6H medium borderline
Bca_GomB08g31920.mRNA1 Alkaloid H6H medium borderline
Bca_GomB08g31980.mRNA1 Alkaloid H6H low borderline
Bca_GomB08g52530.mRNA1 Alkaloid H6H low borderline
Bca_GomB08g59510.mRNA1 Alkaloid H6H low borderline
Bca_GomB08g59560.mRNA1 Alkaloid H6H low borderline
Bca_GomB08g76920.mRNA1 Alkaloid H6H medium borderline
Bca_GomB08g76940.mRNA1 Alkaloid H6H medium borderline
Bca_GomB08g76990.mRNA1 Alkaloid H6H medium borderline
Bca_GomB08g80950.mRNA1 Alkaloid H6H medium borderline