PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: HCT
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Gene Pathway Family Confidence Status
Bca_GomB01g02910.mRNA1 Phenylpropanoid HCT low borderline
Bca_GomB01g03230.mRNA1 Phenylpropanoid HCT low borderline
Bca_GomB01g03380.mRNA1 Phenylpropanoid HCT low borderline
Bca_GomB01g26750.mRNA1 Phenylpropanoid HCT medium pass
Bca_GomB01g73320.mRNA1 Phenylpropanoid HCT medium pass
Bca_GomB02g14860.mRNA1 Phenylpropanoid HCT medium pass
Bca_GomB02g28010.mRNA1 Phenylpropanoid HCT low borderline
Bca_GomB02g49690.mRNA2 Phenylpropanoid HCT low borderline
Bca_GomB02g49960.mRNA1 Phenylpropanoid HCT medium pass
Bca_GomB02g55120.mRNA1 Phenylpropanoid HCT low borderline
Bca_GomB02g57180.mRNA1 Phenylpropanoid HCT low borderline
Bca_GomB03g24200.mRNA1 Phenylpropanoid HCT low borderline
Bca_GomB03g82920.mRNA1 Phenylpropanoid HCT medium pass
Bca_GomB04g07690.mRNA1 Phenylpropanoid HCT medium pass
Bca_GomB04g16290.mRNA1 Phenylpropanoid HCT low borderline
Bca_GomB04g18000.mRNA1 Phenylpropanoid HCT low borderline
Bca_GomB04g41830.mRNA1 Phenylpropanoid HCT medium pass
Bca_GomB04g52050.mRNA1 Phenylpropanoid HCT low borderline
Bca_GomB05g02530.mRNA1 Phenylpropanoid HCT medium pass
Bca_GomB05g06930.mRNA1 Phenylpropanoid HCT low borderline
Bca_GomB05g26240.mRNA1 Phenylpropanoid HCT low borderline
Bca_GomB05g26630.mRNA1 Phenylpropanoid HCT low borderline
Bca_GomB05g43520.mRNA1 Phenylpropanoid HCT medium pass
Bca_GomB05g47940.mRNA1 Phenylpropanoid HCT low borderline
Bca_GomB06g02300.mRNA1 Phenylpropanoid HCT low borderline
Bca_GomB06g17870.mRNA1 Phenylpropanoid HCT low borderline
Bca_GomB06g18070.mRNA1 Phenylpropanoid HCT low borderline
Bca_GomB06g27270.mRNA1 Phenylpropanoid HCT medium pass
Bca_GomB06g45300.mRNA1 Phenylpropanoid HCT medium pass
Bca_GomB06g62190.mRNA1 Phenylpropanoid HCT low borderline
Bca_GomB06g84750.mRNA1 Phenylpropanoid HCT medium pass
Bca_GomB06g85080.mRNA1 Phenylpropanoid HCT medium pass
Bca_GomB08g19640.mRNA1 Phenylpropanoid HCT medium pass
Bca_GomB08g34250.mRNA1 Phenylpropanoid HCT low borderline
Bca_GomB08g62850.mRNA1 Phenylpropanoid HCT low borderline
Bca_GomB08g63080.mRNA1 Phenylpropanoid HCT low borderline
Bca_GomB08g77440.mRNA1 Phenylpropanoid HCT medium pass
Bca_GomC01g23700.mRNA1 Phenylpropanoid HCT low borderline
Bca_GomC02g02340.mRNA1 Phenylpropanoid HCT low borderline
Bca_GomC02g04880.mRNA1 Phenylpropanoid HCT medium pass
Bca_GomC02g61420.mRNA1 Phenylpropanoid HCT medium pass
Bca_GomC03g20790.mRNA1 Phenylpropanoid HCT medium pass
Bca_GomC03g21130.mRNA1 Phenylpropanoid HCT medium pass
Bca_GomC03g21140.mRNA1 Phenylpropanoid HCT medium pass
Bca_GomC03g29610.mRNA1 Phenylpropanoid HCT low borderline
Bca_GomC03g29900.mRNA1 Phenylpropanoid HCT low borderline
Bca_GomC03g31190.mRNA1 Phenylpropanoid HCT low borderline
Bca_GomC03g31530.mRNA1 Phenylpropanoid HCT low borderline
Bca_GomC03g46320.mRNA1 Phenylpropanoid HCT low borderline
Bca_GomC03g62730.mRNA1 Phenylpropanoid HCT medium pass