PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
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Gene Pathway Family Confidence Status
Bca_GomB01g07360.mRNA1 Flavonoid IFR low borderline
Bca_GomB01g07410.mRNA1 Flavonoid IFR low borderline
Bca_GomB01g07470.mRNA1 Flavonoid IFR low borderline
Bca_GomB01g10990.mRNA1 Flavonoid IFR low borderline
Bca_GomB01g46700.mRNA1 Flavonoid IFR low borderline
Bca_GomB02g06560.mRNA1 Flavonoid IFR low borderline
Bca_GomB02g100770.mRNA1 Flavonoid IFR low borderline
Bca_GomB02g103440.mRNA1 Flavonoid IFR low borderline
Bca_GomB02g106210.mRNA1 Flavonoid IFR low borderline
Bca_GomB02g106330.mRNA1 Flavonoid IFR low borderline
Bca_GomB02g14990.mRNA1 Flavonoid IFR low borderline
Bca_GomB02g15700.mRNA1 Flavonoid IFR low borderline
Bca_GomB02g16540.mRNA1 Flavonoid IFR low borderline
Bca_GomB02g39870.mRNA1 Flavonoid IFR medium pass
Bca_GomB02g46550.mRNA1 Flavonoid IFR low borderline
Bca_GomB02g54840.mRNA1 Flavonoid IFR low borderline
Bca_GomB02g73160.mRNA1 Flavonoid IFR low borderline
Bca_GomB02g87380.mRNA1 Flavonoid IFR low borderline
Bca_GomB02g91990.mRNA1 Flavonoid IFR low borderline
Bca_GomB02g93730.mRNA1 Flavonoid IFR low borderline
Bca_GomB03g21520.mRNA1 Flavonoid IFR high pass
Bca_GomB03g28930.mRNA1 Flavonoid IFR medium pass
Bca_GomB03g45030.mRNA1 Flavonoid IFR high pass
Bca_GomB03g45100.mRNA1 Flavonoid IFR high pass
Bca_GomB03g45250.mRNA1 Flavonoid IFR low borderline
Bca_GomB03g67340.mRNA1 Flavonoid IFR high pass
Bca_GomB03g67350.mRNA1 Flavonoid IFR high pass
Bca_GomB03g67390.mRNA1 Flavonoid IFR medium pass
Bca_GomB03g82740.mRNA1 Flavonoid IFR low borderline
Bca_GomB03g86970.mRNA1 Flavonoid IFR high pass
Bca_GomB04g06760.mRNA1 Flavonoid IFR low borderline
Bca_GomB04g06800.mRNA1 Flavonoid IFR low borderline
Bca_GomB04g41040.mRNA1 Flavonoid IFR low borderline
Bca_GomB04g41080.mRNA1 Flavonoid IFR low borderline
Bca_GomB04g44360.mRNA1 Flavonoid IFR low borderline
Bca_GomB04g47410.mRNA1 Flavonoid IFR low borderline
Bca_GomB04g47650.mRNA1 Flavonoid IFR low borderline
Bca_GomB04g57790.mRNA1 Flavonoid IFR high pass
Bca_GomB04g58130.mRNA1 Flavonoid IFR low borderline
Bca_GomB05g18610.mRNA1 Flavonoid IFR low borderline
Bca_GomB05g19290.mRNA1 Flavonoid IFR low borderline
Bca_GomB05g26860.mRNA1 Flavonoid IFR low borderline
Bca_GomB05g27350.mRNA1 Flavonoid IFR low borderline
Bca_GomB05g32770.mRNA1 Flavonoid IFR low borderline
Bca_GomB05g37920.mRNA1 Flavonoid IFR low borderline
Bca_GomB05g41690.mRNA1 Flavonoid IFR low borderline
Bca_GomB05g84290.mRNA1 Flavonoid IFR high pass
Bca_GomB06g02550.mRNA1 Flavonoid IFR low borderline
Bca_GomB06g20590.mRNA1 Flavonoid IFR low borderline
Bca_GomB06g21590.mRNA1 Flavonoid IFR low borderline