PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
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Gene Pathway Family Confidence Status
Bca_GomB06g55260.mRNA1 Flavonoid IFR low borderline
Bca_GomB06g56380.mRNA1 Flavonoid IFR low borderline
Bca_GomB06g74890.mRNA1 Flavonoid IFR low borderline
Bca_GomB06g78330.mRNA1 Flavonoid IFR high pass
Bca_GomB06g79860.mRNA1 Flavonoid IFR low borderline
Bca_GomB06g81220.mRNA1 Flavonoid IFR low borderline
Bca_GomB08g01940.mRNA1 Flavonoid IFR low borderline
Bca_GomB08g40560.mRNA1 Flavonoid IFR low borderline
Bca_GomB08g40630.mRNA1 Flavonoid IFR low borderline
Bca_GomB08g41250.mRNA1 Flavonoid IFR low borderline
Bca_GomB08g54840.mRNA1 Flavonoid IFR low borderline
Bca_GomB08g84470.mRNA1 Flavonoid IFR low borderline
Bca_GomC01g07650.mRNA1 Flavonoid IFR high pass
Bca_GomC01g12280.mRNA1 Flavonoid IFR low borderline
Bca_GomC01g17050.mRNA1 Flavonoid IFR low borderline
Bca_GomC01g22960.mRNA1 Flavonoid IFR low borderline
Bca_GomC01g56200.mRNA1 Flavonoid IFR medium pass
Bca_GomC02g06160.mRNA1 Flavonoid IFR low borderline
Bca_GomC02g09810.mRNA1 Flavonoid IFR low borderline
Bca_GomC02g30840.mRNA1 Flavonoid IFR high pass
Bca_GomC02g61230.mRNA1 Flavonoid IFR low borderline
Bca_GomC03g04940.mRNA1 Flavonoid IFR low borderline
Bca_GomC03g36010.mRNA1 Flavonoid IFR low borderline
Bca_GomC03g40530.mRNA1 Flavonoid IFR low borderline
Bca_GomC03g62090.mRNA1 Flavonoid IFR low borderline
Bca_GomC03g80710.mRNA1 Flavonoid IFR high pass
Bca_GomC04g11040.mRNA1 Flavonoid IFR low borderline
Bca_GomC04g29640.mRNA1 Flavonoid IFR low borderline
Bca_GomC04g43650.mRNA1 Flavonoid IFR low borderline
Bca_GomC04g55650.mRNA1 Flavonoid IFR low borderline
Bca_GomC04g58670.mRNA1 Flavonoid IFR low borderline
Bca_GomC05g10610.mRNA1 Flavonoid IFR low borderline
Bca_GomC05g13480.mRNA1 Flavonoid IFR low borderline
Bca_GomC05g13950.mRNA1 Flavonoid IFR low borderline
Bca_GomC05g19220.mRNA1 Flavonoid IFR low borderline
Bca_GomC05g20310.mRNA1 Flavonoid IFR low borderline
Bca_GomC05g22090.mRNA1 Flavonoid IFR high pass
Bca_GomC05g22360.mRNA1 Flavonoid IFR high pass
Bca_GomC05g29930.mRNA1 Flavonoid IFR low borderline
Bca_GomC05g35440.mRNA1 Flavonoid IFR high pass
Bca_GomC05g35680.mRNA1 Flavonoid IFR low borderline
Bca_GomC05g40510.mRNA1 Flavonoid IFR high pass
Bca_GomC06g32850.mRNA1 Flavonoid IFR low borderline
Bca_GomC06g53290.mRNA1 Flavonoid IFR high pass
Bca_GomC06g53310.mRNA1 Flavonoid IFR high pass
Bca_GomC06g53320.mRNA1 Flavonoid IFR high pass
Bca_GomC07g54240.mRNA1 Flavonoid IFR low borderline
Bca_GomC07g60320.mRNA1 Flavonoid IFR low borderline
Bca_GomC08g24520.mRNA1 Flavonoid IFR low borderline
Bca_GomC08g35400.mRNA1 Flavonoid IFR low borderline