PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Protein/Isoform Record Pathway Family Confidence Status
Bca_GomC02g49910.mRNA1 Flavonoid IFS medium borderline
Bca_GomC02g49920.mRNA1 Flavonoid IFS medium borderline
Bca_GomC02g49930.mRNA1 Flavonoid IFS medium borderline
Bca_GomC02g50780.mRNA1 Flavonoid IFS low borderline
Bca_GomC02g53960.mRNA1 Flavonoid IFS medium borderline
Bca_GomC02g56480.mRNA1 Flavonoid IFS medium borderline
Bca_GomC02g56510.mRNA1 Flavonoid IFS medium borderline
Bca_GomC02g56520.mRNA1 Flavonoid IFS medium borderline
Bca_GomC03g06600.mRNA1 Flavonoid IFS low borderline
Bca_GomC03g19940.mRNA1 Flavonoid IFS low borderline
Bca_GomC03g20200.mRNA1 Flavonoid IFS low borderline
Bca_GomC03g21450.mRNA1 Flavonoid IFS medium borderline
Bca_GomC03g21460.mRNA1 Flavonoid IFS medium borderline
Bca_GomC03g25840.mRNA1 Flavonoid IFS medium borderline
Bca_GomC03g32000.mRNA1 Flavonoid IFS medium borderline
Bca_GomC03g34670.mRNA1 Flavonoid IFS low borderline
Bca_GomC03g41540.mRNA1 Flavonoid IFS medium borderline
Bca_GomC03g42550.mRNA1 Flavonoid IFS medium borderline
Bca_GomC03g46800.mRNA1 Flavonoid IFS low borderline
Bca_GomC03g50540.mRNA1 Flavonoid IFS low borderline
Bca_GomC03g50590.mRNA1 Flavonoid IFS low borderline
Bca_GomC03g50600.mRNA1 Flavonoid IFS low borderline
Bca_GomC03g53920.mRNA1 Flavonoid IFS low borderline
Bca_GomC03g54390.mRNA1 Flavonoid IFS medium pass
Bca_GomC03g58360.mRNA1 Flavonoid IFS medium borderline
Bca_GomC03g78920.mRNA1 Flavonoid IFS low borderline
Bca_GomC03g78930.mRNA1 Flavonoid IFS medium borderline
Bca_GomC03g80880.mRNA1 Flavonoid IFS low borderline
Bca_GomC03g81040.mRNA1 Flavonoid IFS low borderline
Bca_GomC03g82010.mRNA1 Flavonoid IFS medium borderline
Bca_GomC03g82020.mRNA1 Flavonoid IFS medium borderline
Bca_GomC03g82040.mRNA1 Flavonoid IFS medium borderline
Bca_GomC03g88360.mRNA1 Flavonoid IFS medium borderline
Bca_GomC03g95160.mRNA1 Flavonoid IFS medium borderline
Bca_GomC04g02980.mRNA1 Flavonoid IFS medium borderline
Bca_GomC04g07500.mRNA2 Flavonoid IFS low borderline
Bca_GomC04g07520.mRNA2 Flavonoid IFS medium borderline
Bca_GomC04g08050.mRNA1 Flavonoid IFS low borderline
Bca_GomC04g14800.mRNA1 Flavonoid IFS medium borderline
Bca_GomC04g17390.mRNA1 Flavonoid IFS low borderline
Bca_GomC04g17630.mRNA1 Flavonoid IFS low borderline
Bca_GomC04g21610.mRNA1 Flavonoid IFS low borderline
Bca_GomC04g23340.mRNA1 Flavonoid IFS low borderline
Bca_GomC04g24170.mRNA1 Flavonoid IFS low borderline
Bca_GomC04g40170.mRNA1 Flavonoid IFS medium borderline
Bca_GomC04g43290.mRNA1 Flavonoid IFS low borderline
Bca_GomC04g43320.mRNA1 Flavonoid IFS low borderline
Bca_GomC04g44950.mRNA1 Flavonoid IFS medium borderline
Bca_GomC04g45630.mRNA1 Flavonoid IFS low borderline
Bca_GomC04g46770.mRNA1 Flavonoid IFS medium borderline