PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
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Protein/Isoform Record Pathway Family Confidence Status
Bca_GomC08g62750.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC08g62760.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC08g63210.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC08g63220.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC08g63230.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC08g63240.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC08g63260.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC08g63270.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC08g64590.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC08g64600.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC08g64610.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC08g64620.mRNA1 Phenylpropanoid POD low borderline
Bca_GomC08g64630.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC08g64640.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC08g65240.mRNA1 Phenylpropanoid POD low borderline
Bca_GomC08g66360.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC08g67920.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g01980.mRNA1 Phenylpropanoid POD low borderline
Bca_GomC09g01990.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g02400.mRNA1 Phenylpropanoid POD low borderline
Bca_GomC09g05600.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g06550.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g10590.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g13530.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g14240.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g14770.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g15150.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g15620.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g22190.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g23420.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g27690.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g28030.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g28490.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g29940.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g30280.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g30520.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g33440.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g42740.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g43050.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g43190.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g44210.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g44230.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g45710.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g49470.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g50810.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g51320.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g52720.mRNA1 Phenylpropanoid POD low borderline
Bca_GomC09g53210.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g54730.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g58630.mRNA1 Phenylpropanoid POD medium pass