PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

/

Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
Reset
Gene Pathway Family Confidence Status
Bca_GomB02g37410.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g38640.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g38650.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g38660.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g43760.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g44510.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g45600.mRNA1 Phenylpropanoid POD low borderline
Bca_GomB02g46160.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g50320.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g50390.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g50420.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g51600.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g56710.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g58470.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g59780.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g59880.mRNA1 Phenylpropanoid POD low borderline
Bca_GomB02g59890.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g60170.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g62950.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g64760.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g65080.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g65230.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g65240.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g75790.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g79330.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g81210.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g81680.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g88930.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g89000.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g91800.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g93930.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g94170.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g94660.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g95200.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g95960.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g96670.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g97210.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g97370.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g97440.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g97990.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB03g03370.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB03g04240.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB03g04250.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB03g05340.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB03g09730.mRNA1 Phenylpropanoid POD low borderline
Bca_GomB03g09970.mRNA1 Phenylpropanoid POD low borderline
Bca_GomB03g10310.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB03g10570.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB03g14760.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB03g19970.mRNA1 Phenylpropanoid POD medium pass