PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

/

Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
Reset
Gene Pathway Family Confidence Status Best Target
Bca_GomB07g21470.mRNA1 Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
Bca_GomB07g22000.mRNA1 Phenylpropanoid POD medium pass POD__00024__sp_Q9SCX8_PPA17_ARATH
Bca_GomB07g25620.mRNA1 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
Bca_GomB07g30980.mRNA1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Bca_GomB07g31750.mRNA1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Bca_GomB07g32520.mRNA1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Bca_GomB07g32820.mRNA1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Bca_GomB07g37850.mRNA1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Bca_GomB07g38100.mRNA1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Bca_GomB07g44500.mRNA1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Bca_GomB07g55710.mRNA1 Phenylpropanoid POD low borderline POD__00007__sp_P0C5C9_REHYA_ORYSJ
Bca_GomB07g60270.mRNA1 Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
Bca_GomB07g61760.mRNA1 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
Bca_GomB07g63330.mRNA1 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
Bca_GomB07g64250.mRNA1 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
Bca_GomB07g69460.mRNA1 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
Bca_GomB07g69510.mRNA1 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
Bca_GomB07g70650.mRNA1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Bca_GomB07g70780.mRNA1 Phenylpropanoid POD low borderline POD__00001__sp_A5H452_PER70_MAIZE
Bca_GomB07g73790.mRNA1 Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
Bca_GomB07g73830.mRNA1 Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
Bca_GomB07g73840.mRNA1 Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
Bca_GomB07g73850.mRNA1 Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
Bca_GomB07g73860.mRNA1 Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
Bca_GomB08g00770.mRNA1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Bca_GomB08g00780.mRNA1 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
Bca_GomB08g00790.mRNA1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Bca_GomB08g03610.mRNA1 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
Bca_GomB08g03620.mRNA1 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
Bca_GomB08g03890.mRNA1 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
Bca_GomB08g03900.mRNA1 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
Bca_GomB08g13690.mRNA1 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
Bca_GomB08g19080.mRNA1 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
Bca_GomB08g26250.mRNA1 Phenylpropanoid POD medium pass POD__00006__sp_O22850_GPX3_ARATH
Bca_GomB08g26300.mRNA1 Phenylpropanoid POD medium pass POD__00006__sp_O22850_GPX3_ARATH
Bca_GomB08g26360.mRNA1 Phenylpropanoid POD medium pass POD__00006__sp_O22850_GPX3_ARATH
Bca_GomB08g27500.mRNA1 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
Bca_GomB08g27620.mRNA1 Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
Bca_GomB08g30260.mRNA1 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
Bca_GomB08g30330.mRNA1 Phenylpropanoid POD medium pass POD__00013__sp_Q4W1I8_PER1_ZINEL
Bca_GomB08g30880.mRNA1 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
Bca_GomB08g32080.mRNA1 Phenylpropanoid POD low borderline POD__00021__sp_Q9LEH3_PER15_IPOBA
Bca_GomB08g32160.mRNA1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Bca_GomB08g32170.mRNA1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Bca_GomB08g32930.mRNA1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Bca_GomB08g35410.mRNA1 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
Bca_GomB08g35420.mRNA1 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
Bca_GomB08g37150.mRNA1 Phenylpropanoid POD medium pass POD__00006__sp_O22850_GPX3_ARATH
Bca_GomB08g37460.mRNA1 Phenylpropanoid POD medium pass POD__00006__sp_O22850_GPX3_ARATH
Bca_GomB08g42530.mRNA1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA