PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
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Gene Pathway Family Confidence Status
Bca_GomB08g47020.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB08g64490.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB08g64660.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB08g65100.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB08g68310.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB08g73590.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB08g74230.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB08g77920.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB08g77930.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB08g77940.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB08g80790.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB08g81020.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB08g83630.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB08g83660.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB08g83850.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB08g87200.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB08g95220.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB08g95230.mRNA2 Phenylpropanoid POD medium pass
Bca_GomC01g03520.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC01g03860.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC01g04950.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC01g06080.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC01g06470.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC01g08240.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC01g08920.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC01g12580.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC01g15030.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC01g15960.mRNA1 Phenylpropanoid POD low borderline
Bca_GomC01g19960.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC01g25850.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC01g26490.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC01g32070.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC01g36450.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC01g42230.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC01g45660.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC01g51530.mRNA1 Phenylpropanoid POD low borderline
Bca_GomC01g52680.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC01g52730.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC01g52740.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC01g53550.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC01g54750.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC01g57580.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC01g57720.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC02g03810.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC02g05400.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC02g07200.mRNA1 Phenylpropanoid POD low borderline
Bca_GomC02g08560.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC02g08690.mRNA2 Phenylpropanoid POD medium pass
Bca_GomC02g09390.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC02g11250.mRNA1 Phenylpropanoid POD medium pass