PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: RAS
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Gene Pathway Family Confidence Status
Bca_GomB06g62840.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB06g84750.mRNA1 Rosmarinic Acid RAS medium pass
Bca_GomB06g85080.mRNA1 Rosmarinic Acid RAS medium pass
Bca_GomB07g35300.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB07g55430.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB08g18860.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB08g18880.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB08g19640.mRNA1 Rosmarinic Acid RAS medium pass
Bca_GomB08g81380.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomB08g94360.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomC01g01630.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomC01g06480.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomC01g13760.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomC01g14180.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomC02g16900.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomC02g30150.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomC02g44840.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomC02g61420.mRNA1 Rosmarinic Acid RAS medium pass
Bca_GomC03g20790.mRNA1 Rosmarinic Acid RAS medium pass
Bca_GomC03g21130.mRNA1 Rosmarinic Acid RAS medium pass
Bca_GomC03g21140.mRNA1 Rosmarinic Acid RAS medium pass
Bca_GomC03g29610.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomC03g31530.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomC03g62730.mRNA1 Rosmarinic Acid RAS medium pass
Bca_GomC03g63190.mRNA1 Rosmarinic Acid RAS medium pass
Bca_GomC04g06350.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomC04g06780.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomC04g08320.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomC04g22150.mRNA1 Rosmarinic Acid RAS medium pass
Bca_GomC04g60760.mRNA1 Rosmarinic Acid RAS medium pass
Bca_GomC06g02520.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomC06g24310.mRNA1 Rosmarinic Acid RAS medium pass
Bca_GomC06g36510.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomC06g37470.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomC06g54120.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomC07g07530.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomC07g09100.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomC07g15890.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomC07g29900.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomC07g46540.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomC07g64640.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomC08g01990.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomC08g29590.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomC08g38200.mRNA1 Rosmarinic Acid RAS low borderline
Bca_GomC09g57850.mRNA1 Rosmarinic Acid RAS low borderline