PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

/

Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SGD
Reset
Gene Pathway Family Confidence Status
Bca_GomB07g27460.mRNA1 Alkaloid SGD medium pass
Bca_GomB07g61000.mRNA1 Alkaloid SGD medium pass
Bca_GomB07g61060.mRNA1 Alkaloid SGD medium pass
Bca_GomB07g64410.mRNA1 Alkaloid SGD medium pass
Bca_GomB07g76520.mRNA1 Alkaloid SGD medium pass
Bca_GomB07g76530.mRNA1 Alkaloid SGD medium pass
Bca_GomB07g76540.mRNA1 Alkaloid SGD medium pass
Bca_GomB07g76550.mRNA1 Alkaloid SGD low borderline
Bca_GomB08g01970.mRNA1 Alkaloid SGD medium pass
Bca_GomB08g19150.mRNA1 Alkaloid SGD medium pass
Bca_GomB08g19160.mRNA1 Alkaloid SGD medium pass
Bca_GomB08g37690.mRNA1 Alkaloid SGD medium pass
Bca_GomB08g40590.mRNA1 Alkaloid SGD medium pass
Bca_GomB08g93860.mRNA1 Alkaloid SGD medium pass
Bca_GomC01g05860.mRNA1 Alkaloid SGD medium pass
Bca_GomC01g38950.mRNA1 Alkaloid SGD medium pass
Bca_GomC01g38980.mRNA1 Alkaloid SGD medium pass
Bca_GomC01g41870.mRNA1 Alkaloid SGD medium pass
Bca_GomC01g42040.mRNA1 Alkaloid SGD medium pass
Bca_GomC01g42640.mRNA1 Alkaloid SGD medium pass
Bca_GomC01g45410.mRNA1 Alkaloid SGD medium pass
Bca_GomC01g45440.mRNA1 Alkaloid SGD medium pass
Bca_GomC01g53830.mRNA1 Alkaloid SGD medium pass
Bca_GomC01g55180.mRNA1 Alkaloid SGD low borderline
Bca_GomC01g55970.mRNA1 Alkaloid SGD medium pass
Bca_GomC01g55980.mRNA1 Alkaloid SGD medium pass
Bca_GomC01g58660.mRNA1 Alkaloid SGD medium pass
Bca_GomC02g30090.mRNA1 Alkaloid SGD low borderline
Bca_GomC02g55540.mRNA1 Alkaloid SGD medium pass
Bca_GomC02g55550.mRNA1 Alkaloid SGD medium pass
Bca_GomC02g55560.mRNA1 Alkaloid SGD medium pass
Bca_GomC02g55970.mRNA1 Alkaloid SGD low borderline
Bca_GomC02g55980.mRNA1 Alkaloid SGD medium pass
Bca_GomC02g55990.mRNA1 Alkaloid SGD medium pass
Bca_GomC03g03220.mRNA1 Alkaloid SGD medium pass
Bca_GomC03g06500.mRNA1 Alkaloid SGD medium pass
Bca_GomC03g20330.mRNA1 Alkaloid SGD low borderline
Bca_GomC03g36040.mRNA1 Alkaloid SGD medium pass
Bca_GomC03g36080.mRNA1 Alkaloid SGD medium pass
Bca_GomC03g41120.mRNA1 Alkaloid SGD low borderline
Bca_GomC03g75020.mRNA1 Alkaloid SGD medium pass
Bca_GomC03g75580.mRNA1 Alkaloid SGD medium pass
Bca_GomC03g86340.mRNA2 Alkaloid SGD medium pass
Bca_GomC04g01160.mRNA1 Alkaloid SGD medium pass
Bca_GomC04g06080.mRNA1 Alkaloid SGD medium pass
Bca_GomC04g06090.mRNA1 Alkaloid SGD medium pass
Bca_GomC04g06110.mRNA1 Alkaloid SGD low borderline
Bca_GomC04g06120.mRNA1 Alkaloid SGD medium pass
Bca_GomC04g06160.mRNA1 Alkaloid SGD medium pass
Bca_GomC04g06170.mRNA1 Alkaloid SGD medium pass