PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SGD
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Protein/Isoform Record Pathway Family Confidence Status
Bca_GomC04g16860.mRNA1 Alkaloid SGD medium pass
Bca_GomC04g29710.mRNA1 Alkaloid SGD medium pass
Bca_GomC04g31440.mRNA1 Alkaloid SGD medium pass
Bca_GomC04g31450.mRNA1 Alkaloid SGD medium pass
Bca_GomC04g41840.mRNA1 Alkaloid SGD medium pass
Bca_GomC04g51590.mRNA1 Alkaloid SGD medium pass
Bca_GomC04g54360.mRNA1 Alkaloid SGD medium pass
Bca_GomC04g63820.mRNA1 Alkaloid SGD medium pass
Bca_GomC04g63830.mRNA1 Alkaloid SGD low borderline
Bca_GomC04g63840.mRNA1 Alkaloid SGD medium pass
Bca_GomC04g63850.mRNA1 Alkaloid SGD medium pass
Bca_GomC04g64630.mRNA1 Alkaloid SGD medium pass
Bca_GomC04g64640.mRNA1 Alkaloid SGD medium pass
Bca_GomC04g64650.mRNA1 Alkaloid SGD medium pass
Bca_GomC04g66240.mRNA1 Alkaloid SGD medium pass
Bca_GomC05g03740.mRNA1 Alkaloid SGD medium pass
Bca_GomC05g17030.mRNA1 Alkaloid SGD low borderline
Bca_GomC05g28720.mRNA1 Alkaloid SGD medium pass
Bca_GomC05g37230.mRNA1 Alkaloid SGD medium pass
Bca_GomC05g37300.mRNA1 Alkaloid SGD medium pass
Bca_GomC05g53490.mRNA1 Alkaloid SGD medium pass
Bca_GomC05g53500.mRNA1 Alkaloid SGD medium pass
Bca_GomC05g58390.mRNA1 Alkaloid SGD low borderline
Bca_GomC05g60260.mRNA1 Alkaloid SGD medium pass
Bca_GomC05g60290.mRNA1 Alkaloid SGD medium pass
Bca_GomC06g08260.mRNA1 Alkaloid SGD medium pass
Bca_GomC06g17590.mRNA1 Alkaloid SGD medium pass
Bca_GomC06g17600.mRNA1 Alkaloid SGD medium pass
Bca_GomC06g17620.mRNA1 Alkaloid SGD medium pass
Bca_GomC06g17660.mRNA1 Alkaloid SGD medium pass
Bca_GomC06g18860.mRNA1 Alkaloid SGD medium pass
Bca_GomC06g19070.mRNA1 Alkaloid SGD medium pass
Bca_GomC06g21950.mRNA1 Alkaloid SGD medium pass
Bca_GomC06g30930.mRNA1 Alkaloid SGD low borderline
Bca_GomC06g30940.mRNA1 Alkaloid SGD medium pass
Bca_GomC06g41620.mRNA1 Alkaloid SGD medium pass
Bca_GomC07g14610.mRNA1 Alkaloid SGD medium pass
Bca_GomC07g14620.mRNA1 Alkaloid SGD medium pass
Bca_GomC07g16900.mRNA1 Alkaloid SGD medium pass
Bca_GomC07g18650.mRNA1 Alkaloid SGD medium pass
Bca_GomC07g35380.mRNA1 Alkaloid SGD medium pass
Bca_GomC07g51180.mRNA1 Alkaloid SGD medium pass
Bca_GomC07g52130.mRNA1 Alkaloid SGD medium pass
Bca_GomC07g52140.mRNA1 Alkaloid SGD medium pass
Bca_GomC07g71510.mRNA1 Alkaloid SGD medium pass
Bca_GomC07g71530.mRNA1 Alkaloid SGD medium pass
Bca_GomC07g71540.mRNA1 Alkaloid SGD medium pass
Bca_GomC07g71560.mRNA1 Alkaloid SGD medium pass
Bca_GomC07g71690.mRNA1 Alkaloid SGD medium pass
Bca_GomC07g72630.mRNA1 Alkaloid SGD low borderline