PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SLS
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Gene Pathway Family Confidence Status
Bca_GomB07g30360.mRNA1 Alkaloid SLS medium borderline
Bca_GomB07g52120.mRNA1 Alkaloid SLS medium borderline
Bca_GomB07g52150.mRNA1 Alkaloid SLS medium borderline
Bca_GomB07g60890.mRNA1 Alkaloid SLS medium borderline
Bca_GomB07g62120.mRNA3 Alkaloid SLS medium borderline
Bca_GomB07g64530.mRNA1 Alkaloid SLS medium borderline
Bca_GomB08g36950.mRNA1 Alkaloid SLS medium borderline
Bca_GomB08g39340.mRNA1 Alkaloid SLS medium borderline
Bca_GomC01g02320.mRNA1 Alkaloid SLS medium borderline
Bca_GomC01g48600.mRNA1 Alkaloid SLS medium borderline
Bca_GomC01g48620.mRNA1 Alkaloid SLS medium borderline
Bca_GomC01g48630.mRNA1 Alkaloid SLS medium borderline
Bca_GomC01g48640.mRNA1 Alkaloid SLS medium borderline
Bca_GomC01g48650.mRNA1 Alkaloid SLS medium borderline
Bca_GomC01g48660.mRNA1 Alkaloid SLS medium borderline
Bca_GomC01g48670.mRNA1 Alkaloid SLS medium borderline
Bca_GomC01g58500.mRNA1 Alkaloid SLS medium borderline
Bca_GomC02g30630.mRNA1 Alkaloid SLS medium borderline
Bca_GomC02g36310.mRNA1 Alkaloid SLS low borderline
Bca_GomC03g02860.mRNA1 Alkaloid SLS medium borderline
Bca_GomC03g02870.mRNA1 Alkaloid SLS medium borderline
Bca_GomC03g24320.mRNA1 Alkaloid SLS medium borderline
Bca_GomC03g34670.mRNA1 Alkaloid SLS medium borderline
Bca_GomC03g50600.mRNA1 Alkaloid SLS medium borderline
Bca_GomC03g80880.mRNA1 Alkaloid SLS medium borderline
Bca_GomC03g81040.mRNA1 Alkaloid SLS medium borderline
Bca_GomC04g02410.mRNA1 Alkaloid SLS medium borderline
Bca_GomC04g07500.mRNA2 Alkaloid SLS medium borderline
Bca_GomC04g24170.mRNA1 Alkaloid SLS medium borderline
Bca_GomC04g43030.mRNA1 Alkaloid SLS medium borderline
Bca_GomC04g43320.mRNA1 Alkaloid SLS medium borderline
Bca_GomC04g66710.mRNA1 Alkaloid SLS low borderline
Bca_GomC05g01890.mRNA1 Alkaloid SLS medium borderline
Bca_GomC05g50960.mRNA1 Alkaloid SLS medium borderline
Bca_GomC05g50970.mRNA1 Alkaloid SLS medium borderline
Bca_GomC05g50980.mRNA1 Alkaloid SLS medium borderline
Bca_GomC06g23050.mRNA2 Alkaloid SLS medium borderline
Bca_GomC06g28200.mRNA1 Alkaloid SLS medium borderline
Bca_GomC06g39520.mRNA1 Alkaloid SLS medium borderline
Bca_GomC06g53150.mRNA1 Alkaloid SLS medium borderline
Bca_GomC07g36870.mRNA1 Alkaloid SLS medium borderline
Bca_GomC07g36900.mRNA1 Alkaloid SLS medium borderline
Bca_GomC07g36970.mRNA1 Alkaloid SLS medium borderline
Bca_GomC07g36980.mRNA1 Alkaloid SLS medium borderline
Bca_GomC07g36990.mRNA1 Alkaloid SLS medium borderline
Bca_GomC07g37060.mRNA1 Alkaloid SLS low borderline
Bca_GomC07g37070.mRNA1 Alkaloid SLS medium borderline
Bca_GomC07g37090.mRNA1 Alkaloid SLS medium borderline
Bca_GomC07g37120.mRNA1 Alkaloid SLS medium borderline
Bca_GomC07g37130.mRNA1 Alkaloid SLS medium pass