PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

/

Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
Reset
Gene Pathway Family Confidence Status
Bca_GomB07g24130.mRNA1 Alkaloid T16H medium borderline
Bca_GomB07g27810.mRNA1 Alkaloid T16H medium borderline
Bca_GomB07g48460.mRNA1 Alkaloid T16H medium borderline
Bca_GomB07g56250.mRNA1 Alkaloid T16H medium borderline
Bca_GomB07g73660.mRNA1 Alkaloid T16H low borderline
Bca_GomB08g25500.mRNA1 Alkaloid T16H medium borderline
Bca_GomB08g25630.mRNA1 Alkaloid T16H medium borderline
Bca_GomB08g45630.mRNA1 Alkaloid T16H low borderline
Bca_GomB08g50850.mRNA1 Alkaloid T16H medium borderline
Bca_GomB08g65990.mRNA1 Alkaloid T16H medium borderline
Bca_GomC01g32800.mRNA1 Alkaloid T16H medium borderline
Bca_GomC01g49620.mRNA1 Alkaloid T16H medium borderline
Bca_GomC01g49740.mRNA1 Alkaloid T16H medium borderline
Bca_GomC01g49800.mRNA1 Alkaloid T16H medium borderline
Bca_GomC02g23850.mRNA1 Alkaloid T16H medium borderline
Bca_GomC02g23860.mRNA1 Alkaloid T16H medium borderline
Bca_GomC02g49440.mRNA1 Alkaloid T16H medium borderline
Bca_GomC02g49920.mRNA1 Alkaloid T16H medium borderline
Bca_GomC02g49930.mRNA1 Alkaloid T16H medium borderline
Bca_GomC02g56520.mRNA1 Alkaloid T16H medium borderline
Bca_GomC03g02880.mRNA1 Alkaloid T16H low borderline
Bca_GomC03g05910.mRNA1 Alkaloid T16H medium borderline
Bca_GomC03g06370.mRNA1 Alkaloid T16H medium borderline
Bca_GomC03g25840.mRNA1 Alkaloid T16H medium borderline
Bca_GomC03g25850.mRNA1 Alkaloid T16H medium borderline
Bca_GomC03g25960.mRNA1 Alkaloid T16H medium borderline
Bca_GomC03g39680.mRNA1 Alkaloid T16H medium borderline
Bca_GomC03g42550.mRNA1 Alkaloid T16H medium borderline
Bca_GomC03g54420.mRNA1 Alkaloid T16H medium borderline
Bca_GomC03g68670.mRNA1 Alkaloid T16H medium borderline
Bca_GomC03g78930.mRNA1 Alkaloid T16H medium borderline
Bca_GomC03g86640.mRNA1 Alkaloid T16H medium borderline
Bca_GomC04g20080.mRNA1 Alkaloid T16H medium borderline
Bca_GomC04g21610.mRNA1 Alkaloid T16H medium borderline
Bca_GomC04g45990.mRNA1 Alkaloid T16H low borderline
Bca_GomC04g46770.mRNA1 Alkaloid T16H medium borderline
Bca_GomC04g52390.mRNA1 Alkaloid T16H medium borderline
Bca_GomC04g52410.mRNA1 Alkaloid T16H medium borderline
Bca_GomC04g55690.mRNA1 Alkaloid T16H medium borderline
Bca_GomC04g56480.mRNA1 Alkaloid T16H medium borderline
Bca_GomC04g65100.mRNA1 Alkaloid T16H medium borderline
Bca_GomC05g01800.mRNA1 Alkaloid T16H medium borderline
Bca_GomC05g02830.mRNA1 Alkaloid T16H medium borderline
Bca_GomC05g12770.mRNA1 Alkaloid T16H medium borderline
Bca_GomC05g51130.mRNA1 Alkaloid T16H medium borderline
Bca_GomC05g51150.mRNA1 Alkaloid T16H medium borderline
Bca_GomC05g52470.mRNA1 Alkaloid T16H low borderline
Bca_GomC05g59550.mRNA1 Alkaloid T16H medium borderline
Bca_GomC05g59560.mRNA1 Alkaloid T16H medium borderline
Bca_GomC07g07100.mRNA1 Alkaloid T16H medium borderline