PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

/

Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
Reset
Gene Pathway Family Confidence Status
Bca_GomB05g12240.mRNA1 Alkaloid T3O medium borderline
Bca_GomB05g12250.mRNA1 Alkaloid T3O medium borderline
Bca_GomB05g13020.mRNA1 Alkaloid T3O medium pass
Bca_GomB05g13100.mRNA1 Alkaloid T3O medium pass
Bca_GomB05g13140.mRNA1 Alkaloid T3O medium borderline
Bca_GomB05g17700.mRNA1 Alkaloid T3O medium borderline
Bca_GomB05g31100.mRNA1 Alkaloid T3O medium borderline
Bca_GomB05g32290.mRNA1 Alkaloid T3O medium pass
Bca_GomB05g35270.mRNA1 Alkaloid T3O medium borderline
Bca_GomB05g35590.mRNA1 Alkaloid T3O medium pass
Bca_GomB05g35600.mRNA1 Alkaloid T3O medium pass
Bca_GomB05g35610.mRNA1 Alkaloid T3O medium pass
Bca_GomB05g35650.mRNA1 Alkaloid T3O medium pass
Bca_GomB05g36090.mRNA1 Alkaloid T3O medium borderline
Bca_GomB05g38910.mRNA1 Alkaloid T3O low borderline
Bca_GomB05g44740.mRNA1 Alkaloid T3O medium pass
Bca_GomB05g64060.mRNA1 Alkaloid T3O medium borderline
Bca_GomB05g70340.mRNA1 Alkaloid T3O medium borderline
Bca_GomB06g09040.mRNA1 Alkaloid T3O medium pass
Bca_GomB06g14200.mRNA1 Alkaloid T3O medium borderline
Bca_GomB06g17070.mRNA1 Alkaloid T3O medium borderline
Bca_GomB06g17490.mRNA1 Alkaloid T3O medium borderline
Bca_GomB06g31170.mRNA1 Alkaloid T3O medium borderline
Bca_GomB06g33120.mRNA1 Alkaloid T3O low borderline
Bca_GomB06g33700.mRNA1 Alkaloid T3O low borderline
Bca_GomB06g35700.mRNA1 Alkaloid T3O medium pass
Bca_GomB06g38380.mRNA1 Alkaloid T3O low borderline
Bca_GomB06g38410.mRNA1 Alkaloid T3O low borderline
Bca_GomB06g51700.mRNA1 Alkaloid T3O medium borderline
Bca_GomB06g52260.mRNA1 Alkaloid T3O medium borderline
Bca_GomB06g58360.mRNA1 Alkaloid T3O medium pass
Bca_GomB06g70720.mRNA1 Alkaloid T3O medium borderline
Bca_GomB06g71760.mRNA1 Alkaloid T3O medium borderline
Bca_GomB06g75220.mRNA1 Alkaloid T3O medium borderline
Bca_GomB06g76250.mRNA1 Alkaloid T3O medium borderline
Bca_GomB06g76260.mRNA1 Alkaloid T3O medium borderline
Bca_GomB06g83530.mRNA1 Alkaloid T3O medium borderline
Bca_GomB06g83600.mRNA1 Alkaloid T3O medium borderline
Bca_GomB06g86670.mRNA2 Alkaloid T3O medium borderline
Bca_GomB07g03880.mRNA1 Alkaloid T3O low borderline
Bca_GomB07g09500.mRNA1 Alkaloid T3O low borderline
Bca_GomB07g18540.mRNA1 Alkaloid T3O medium pass
Bca_GomB07g24140.mRNA1 Alkaloid T3O medium borderline
Bca_GomB07g34520.mRNA1 Alkaloid T3O low borderline
Bca_GomB07g38530.mRNA1 Alkaloid T3O medium borderline
Bca_GomB07g39330.mRNA1 Alkaloid T3O medium borderline
Bca_GomB07g39340.mRNA1 Alkaloid T3O medium borderline
Bca_GomB07g41350.mRNA1 Alkaloid T3O medium pass
Bca_GomB07g41490.mRNA1 Alkaloid T3O low borderline
Bca_GomB07g48390.mRNA1 Alkaloid T3O medium borderline