PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Family-Level Assignments
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Family-Level Assignments Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Family-level assignments Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Gene Pathway Family Confidence Status Best Target
Bca_GomB01g18820.mRNA1 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
Bca_GomB01g18830.mRNA1 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
Bca_GomB01g18850.mRNA1 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
Bca_GomB02g56460.mRNA1 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
Bca_GomB02g58280.mRNA1 Terpenoid TPS low borderline TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
Bca_GomB02g67280.mRNA1 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
Bca_GomB02g67290.mRNA1 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
Bca_GomB02g67340.mRNA1 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
Bca_GomB02g74080.mRNA1 Terpenoid TPS medium pass TPS__00061__sp_B9SBU9_TPS5_RICCO
Bca_GomB02g74090.mRNA1 Terpenoid TPS medium pass TPS__00076__sp_D0UZK2_TPS1_CITSI
Bca_GomB02g76260.mRNA1 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
Bca_GomB02g77130.mRNA2 Terpenoid TPS medium pass TPS__00005__sp_A0A140KFG9_TPS1_CAMBE
Bca_GomB02g77690.mRNA1 Terpenoid TPS medium pass TPS__00005__sp_A0A140KFG9_TPS1_CAMBE
Bca_GomB03g30410.mRNA1 Terpenoid TPS low borderline TPS__00020__sp_A0A1V0QSF6_TS7FN_CANSA
Bca_GomB03g30420.mRNA1 Terpenoid TPS medium pass TPS__00078__sp_D5KXD2_TPS12_SOLLC
Bca_GomB03g30600.mRNA2 Terpenoid TPS low borderline TPS__00077__sp_D2YZP9_BISS_ZINOF
Bca_GomB03g31450.mRNA1 Terpenoid TPS medium pass TPS__00044__sp_A0A348AUW1_TPS1G_CAMHI
Bca_GomB03g98210.mRNA1 Terpenoid TPS medium pass TPS__00040__sp_A0A348AUV6_TPS1B_CAMHI
Bca_GomB04g20790.mRNA1 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
Bca_GomB04g26430.mRNA1 Terpenoid TPS medium pass TPS__00044__sp_A0A348AUW1_TPS1G_CAMHI
Bca_GomB04g26570.mRNA1 Terpenoid TPS medium pass TPS__00044__sp_A0A348AUW1_TPS1G_CAMHI
Bca_GomB04g26590.mRNA1 Terpenoid TPS medium pass TPS__00044__sp_A0A348AUW1_TPS1G_CAMHI
Bca_GomB04g31640.mRNA1 Terpenoid TPS medium pass TPS__00040__sp_A0A348AUV6_TPS1B_CAMHI
Bca_GomB04g32170.mRNA1 Terpenoid TPS low borderline TPS__00054__sp_A0A7J6HK32_TS9FN_CANSA
Bca_GomB04g36300.mRNA1 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
Bca_GomB05g31090.mRNA1 Terpenoid TPS medium pass TPS__00008__sp_A0A167V661_TPS8_CAMSI
Bca_GomB05g31670.mRNA1 Terpenoid TPS medium pass TPS__00061__sp_B9SBU9_TPS5_RICCO
Bca_GomB05g33950.mRNA1 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
Bca_GomB05g34370.mRNA1 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
Bca_GomB05g50980.mRNA1 Terpenoid TPS medium pass TPS__00005__sp_A0A140KFG9_TPS1_CAMBE
Bca_GomB06g33980.mRNA1 Terpenoid TPS medium pass TPS__00044__sp_A0A348AUW1_TPS1G_CAMHI
Bca_GomB06g45940.mRNA1 Terpenoid TPS medium pass TPS__00040__sp_A0A348AUV6_TPS1B_CAMHI
Bca_GomB06g69970.mRNA1 Terpenoid TPS medium pass TPS__00044__sp_A0A348AUW1_TPS1G_CAMHI
Bca_GomB06g82840.mRNA1 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
Bca_GomB06g82900.mRNA1 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
Bca_GomB06g82980.mRNA1 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
Bca_GomB07g05850.mRNA1 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
Bca_GomB07g19080.mRNA2 Terpenoid TPS medium pass TPS__00040__sp_A0A348AUV6_TPS1B_CAMHI
Bca_GomB07g52200.mRNA1 Terpenoid TPS medium pass TPS__00040__sp_A0A348AUV6_TPS1B_CAMHI
Bca_GomB07g52210.mRNA1 Terpenoid TPS medium pass TPS__00018__sp_A0A1V0QSF3_TS8FN_CANSA
Bca_GomB07g52220.mRNA1 Terpenoid TPS medium pass TPS__00008__sp_A0A167V661_TPS8_CAMSI
Bca_GomB07g52520.mRNA1 Terpenoid TPS medium pass TPS__00040__sp_A0A348AUV6_TPS1B_CAMHI
Bca_GomB07g52530.mRNA1 Terpenoid TPS medium pass TPS__00008__sp_A0A167V661_TPS8_CAMSI
Bca_GomB07g59740.mRNA1 Terpenoid TPS medium pass TPS__00001__sp_A0A0D4D912_TPS3_XANST
Bca_GomB07g60030.mRNA1 Terpenoid TPS medium pass TPS__00001__sp_A0A0D4D912_TPS3_XANST
Bca_GomB08g44960.mRNA1 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
Bca_GomB08g48330.mRNA1 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
Bca_GomB08g51170.mRNA1 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
Bca_GomB08g59280.mRNA1 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
Bca_GomC01g18330.mRNA1 Terpenoid TPS medium pass TPS__00005__sp_A0A140KFG9_TPS1_CAMBE