PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Bca_GomB07g47140.mRNA2 Terpenoid UGT medium pass UGT__00096__sp_Q9LSY8_U71B2_ARATH
Bca_GomB07g53870.mRNA1 Terpenoid UGT medium pass UGT__00102__sp_Q9LZD8_U89A2_ARATH
Bca_GomB07g60690.mRNA1 Terpenoid UGT medium pass UGT__00054__sp_O23406_U75D1_ARATH
Bca_GomB07g60710.mRNA1 Terpenoid UGT medium pass UGT__00054__sp_O23406_U75D1_ARATH
Bca_GomB07g62830.mRNA1 Terpenoid UGT medium pass UGT__00069__sp_Q0WW21_U75C1_ARATH
Bca_GomB07g76380.mRNA1 Terpenoid UGT medium pass UGT__00102__sp_Q9LZD8_U89A2_ARATH
Bca_GomB08g01390.mRNA1 Terpenoid UGT medium pass UGT__00035__sp_I1KEV6_FG3H_SOYBN
Bca_GomB08g18170.mRNA1 Terpenoid UGT medium pass UGT__00099__sp_Q9LTH3_U76E1_ARATH
Bca_GomB08g18530.mRNA1 Terpenoid UGT medium pass UGT__00098__sp_Q9LTH2_U76E2_ARATH
Bca_GomB08g22700.mRNA1 Terpenoid UGT medium pass UGT__00035__sp_I1KEV6_FG3H_SOYBN
Bca_GomB08g22710.mRNA1 Terpenoid UGT medium pass UGT__00035__sp_I1KEV6_FG3H_SOYBN
Bca_GomB08g22720.mRNA1 Terpenoid UGT medium pass UGT__00035__sp_I1KEV6_FG3H_SOYBN
Bca_GomB08g25080.mRNA1 Terpenoid UGT medium pass UGT__00105__sp_Q9SK82_U85A1_ARATH
Bca_GomB08g25450.mRNA2 Terpenoid UGT medium pass UGT__00105__sp_Q9SK82_U85A1_ARATH
Bca_GomB08g26480.mRNA2 Terpenoid UGT medium pass UGT__00106__sp_Q9SKC5_U74D1_ARATH
Bca_GomB08g29890.mRNA1 Terpenoid UGT medium pass UGT__00044__sp_K4GIP0_73C12_BARVU
Bca_GomB08g29900.mRNA1 Terpenoid UGT medium pass UGT__00019__sp_A0A2R4LMF9_73C25_BARVU
Bca_GomB08g29910.mRNA1 Terpenoid UGT medium pass UGT__00109__sp_Q9ZQ94_U73C5_ARATH
Bca_GomB08g30570.mRNA1 Terpenoid UGT medium pass UGT__00044__sp_K4GIP0_73C12_BARVU
Bca_GomB08g30580.mRNA1 Terpenoid UGT medium pass UGT__00019__sp_A0A2R4LMF9_73C25_BARVU
Bca_GomB08g30590.mRNA1 Terpenoid UGT medium pass UGT__00109__sp_Q9ZQ94_U73C5_ARATH
Bca_GomB08g37740.mRNA1 Terpenoid UGT medium pass UGT__00050__sp_O22822_U74F2_ARATH
Bca_GomB08g37750.mRNA1 Terpenoid UGT medium pass UGT__00050__sp_O22822_U74F2_ARATH
Bca_GomB08g42600.mRNA1 Terpenoid UGT medium pass UGT__00060__sp_O82383_U71D1_ARATH
Bca_GomB08g42950.mRNA1 Terpenoid UGT medium pass UGT__00060__sp_O82383_U71D1_ARATH
Bca_GomB08g42960.mRNA1 Terpenoid UGT medium pass UGT__00060__sp_O82383_U71D1_ARATH
Bca_GomB08g44430.mRNA1 Terpenoid UGT medium pass UGT__00050__sp_O22822_U74F2_ARATH
Bca_GomB08g44610.mRNA1 Terpenoid UGT medium pass UGT__00056__sp_O48715_U76D1_ARATH
Bca_GomB08g53090.mRNA1 Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
Bca_GomB08g53840.mRNA1 Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
Bca_GomB08g66040.mRNA1 Terpenoid UGT medium pass UGT__00024__sp_B3VI56_U91D2_STERE
Bca_GomB08g73180.mRNA1 Terpenoid UGT medium pass UGT__00080__sp_Q94AB5_U7E12_ARATH
Bca_GomB08g73190.mRNA1 Terpenoid UGT medium pass UGT__00099__sp_Q9LTH3_U76E1_ARATH
Bca_GomB08g74080.mRNA1 Terpenoid UGT medium pass UGT__00108__sp_Q9SYK9_U74E2_ARATH
Bca_GomB08g83330.mRNA1 Terpenoid UGT low borderline UGT__00040__sp_K4D422_U73C4_SOLLC
Bca_GomB08g84110.mRNA1 Terpenoid UGT medium pass UGT__00019__sp_A0A2R4LMF9_73C25_BARVU
Bca_GomB08g86420.mRNA1 Terpenoid UGT medium pass UGT__00081__sp_Q9C768_U76B1_ARATH
Bca_GomC01g04610.mRNA1 Terpenoid UGT medium pass UGT__00079__sp_Q94A84_U72E1_ARATH
Bca_GomC01g08070.mRNA1 Terpenoid UGT medium pass UGT__00077__sp_Q8VZE9_U73B1_ARATH
Bca_GomC01g08080.mRNA1 Terpenoid UGT medium pass UGT__00078__sp_Q8W491_U73B3_ARATH
Bca_GomC01g08090.mRNA1 Terpenoid UGT medium pass UGT__00078__sp_Q8W491_U73B3_ARATH
Bca_GomC01g33810.mRNA1 Terpenoid UGT medium pass UGT__00099__sp_Q9LTH3_U76E1_ARATH
Bca_GomC01g33820.mRNA1 Terpenoid UGT medium pass UGT__00107__sp_Q9SNB1_U7E11_ARATH
Bca_GomC01g40930.mRNA1 Terpenoid UGT medium pass UGT__00082__sp_Q9C9B0_U89B1_ARATH
Bca_GomC01g41550.mRNA1 Terpenoid UGT medium pass UGT__00045__sp_K4GKX2_73C10_BARVU
Bca_GomC01g41560.mRNA1 Terpenoid UGT medium pass UGT__00019__sp_A0A2R4LMF9_73C25_BARVU
Bca_GomC01g42220.mRNA1 Terpenoid UGT medium pass UGT__00094__sp_Q9LSY4_U71B8_ARATH
Bca_GomC01g42250.mRNA1 Terpenoid UGT medium pass UGT__00096__sp_Q9LSY8_U71B2_ARATH
Bca_GomC01g42410.mRNA1 Terpenoid UGT medium pass UGT__00100__sp_Q9LVF0_U84A2_ARATH
Bca_GomC01g56960.mRNA1 Terpenoid UGT medium pass UGT__00077__sp_Q8VZE9_U73B1_ARATH