PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Bca_GomC01g56970.mRNA1 Terpenoid UGT medium pass UGT__00078__sp_Q8W491_U73B3_ARATH
Bca_GomC01g57340.mRNA1 Terpenoid UGT medium pass UGT__00106__sp_Q9SKC5_U74D1_ARATH
Bca_GomC01g58560.mRNA1 Terpenoid UGT medium pass UGT__00024__sp_B3VI56_U91D2_STERE
Bca_GomC02g10460.mRNA1 Terpenoid UGT medium pass UGT__00086__sp_Q9LFJ8_U78D2_ARATH
Bca_GomC02g13340.mRNA1 Terpenoid UGT medium pass UGT__00093__sp_Q9LR44_U75B1_ARATH
Bca_GomC02g16620.mRNA1 Terpenoid UGT medium pass UGT__00098__sp_Q9LTH2_U76E2_ARATH
Bca_GomC02g34770.mRNA1 Terpenoid UGT medium pass UGT__00105__sp_Q9SK82_U85A1_ARATH
Bca_GomC02g36600.mRNA1 Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
Bca_GomC02g36610.mRNA1 Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
Bca_GomC02g48940.mRNA1 Terpenoid UGT medium pass UGT__00078__sp_Q8W491_U73B3_ARATH
Bca_GomC03g08190.mRNA1 Terpenoid UGT medium pass UGT__00102__sp_Q9LZD8_U89A2_ARATH
Bca_GomC03g08980.mRNA1 Terpenoid UGT medium pass UGT__00102__sp_Q9LZD8_U89A2_ARATH
Bca_GomC03g16160.mRNA1 Terpenoid UGT medium pass UGT__00044__sp_K4GIP0_73C12_BARVU
Bca_GomC03g19640.mRNA1 Terpenoid UGT medium pass UGT__00098__sp_Q9LTH2_U76E2_ARATH
Bca_GomC03g23560.mRNA1 Terpenoid UGT medium pass UGT__00035__sp_I1KEV6_FG3H_SOYBN
Bca_GomC03g23570.mRNA1 Terpenoid UGT medium pass UGT__00035__sp_I1KEV6_FG3H_SOYBN
Bca_GomC03g25650.mRNA1 Terpenoid UGT medium pass UGT__00105__sp_Q9SK82_U85A1_ARATH
Bca_GomC03g27870.mRNA1 Terpenoid UGT medium pass UGT__00044__sp_K4GIP0_73C12_BARVU
Bca_GomC03g27880.mRNA2 Terpenoid UGT medium pass UGT__00044__sp_K4GIP0_73C12_BARVU
Bca_GomC03g33910.mRNA1 Terpenoid UGT medium pass UGT__00050__sp_O22822_U74F2_ARATH
Bca_GomC03g33920.mRNA1 Terpenoid UGT medium pass UGT__00050__sp_O22822_U74F2_ARATH
Bca_GomC03g33930.mRNA1 Terpenoid UGT medium pass UGT__00050__sp_O22822_U74F2_ARATH
Bca_GomC03g33960.mRNA1 Terpenoid UGT medium pass UGT__00050__sp_O22822_U74F2_ARATH
Bca_GomC03g33980.mRNA1 Terpenoid UGT medium pass UGT__00050__sp_O22822_U74F2_ARATH
Bca_GomC03g38020.mRNA1 Terpenoid UGT medium pass UGT__00056__sp_O48715_U76D1_ARATH
Bca_GomC03g38030.mRNA1 Terpenoid UGT medium pass UGT__00056__sp_O48715_U76D1_ARATH
Bca_GomC03g43860.mRNA1 Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
Bca_GomC03g55500.mRNA1 Terpenoid UGT medium pass UGT__00096__sp_Q9LSY8_U71B2_ARATH
Bca_GomC03g55510.mRNA1 Terpenoid UGT medium pass UGT__00096__sp_Q9LSY8_U71B2_ARATH
Bca_GomC03g55560.mRNA1 Terpenoid UGT medium pass UGT__00094__sp_Q9LSY4_U71B8_ARATH
Bca_GomC03g60180.mRNA1 Terpenoid UGT medium pass UGT__00112__sp_Q9ZQG4_U73B5_ARATH
Bca_GomC03g61160.mRNA1 Terpenoid UGT medium pass UGT__00046__sp_K4GMD6_73C9_BARVU
Bca_GomC03g62570.mRNA1 Terpenoid UGT medium pass UGT__00057__sp_O81498_U72E3_ARATH
Bca_GomC03g62580.mRNA1 Terpenoid UGT medium pass UGT__00079__sp_Q94A84_U72E1_ARATH
Bca_GomC03g73720.mRNA1 Terpenoid UGT medium pass UGT__00107__sp_Q9SNB1_U7E11_ARATH
Bca_GomC03g73740.mRNA1 Terpenoid UGT medium pass UGT__00099__sp_Q9LTH3_U76E1_ARATH
Bca_GomC03g73810.mRNA1 Terpenoid UGT medium pass UGT__00099__sp_Q9LTH3_U76E1_ARATH
Bca_GomC03g86910.mRNA1 Terpenoid UGT medium pass UGT__00078__sp_Q8W491_U73B3_ARATH
Bca_GomC03g86920.mRNA1 Terpenoid UGT medium pass UGT__00078__sp_Q8W491_U73B3_ARATH
Bca_GomC03g90500.mRNA1 Terpenoid UGT medium pass UGT__00009__sp_A0A0G4DBR5_FG3N_SOYBN
Bca_GomC03g90880.mRNA1 Terpenoid UGT medium pass UGT__00009__sp_A0A0G4DBR5_FG3N_SOYBN
Bca_GomC04g05510.mRNA1 Terpenoid UGT medium pass UGT__00050__sp_O22822_U74F2_ARATH
Bca_GomC04g05520.mRNA1 Terpenoid UGT medium pass UGT__00049__sp_O22820_U74F1_ARATH
Bca_GomC04g05530.mRNA1 Terpenoid UGT medium pass UGT__00050__sp_O22822_U74F2_ARATH
Bca_GomC04g05540.mRNA1 Terpenoid UGT medium pass UGT__00050__sp_O22822_U74F2_ARATH
Bca_GomC04g05550.mRNA1 Terpenoid UGT medium pass UGT__00049__sp_O22820_U74F1_ARATH
Bca_GomC04g05630.mRNA1 Terpenoid UGT medium pass UGT__00050__sp_O22822_U74F2_ARATH
Bca_GomC04g11860.mRNA1 Terpenoid UGT medium pass UGT__00105__sp_Q9SK82_U85A1_ARATH
Bca_GomC04g11870.mRNA1 Terpenoid UGT medium pass UGT__00105__sp_Q9SK82_U85A1_ARATH
Bca_GomC04g12010.mRNA1 Terpenoid UGT medium pass UGT__00041__sp_K4GGT4_73C11_BARVU