PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Bca_GomC04g12020.mRNA1 Terpenoid UGT medium pass UGT__00041__sp_K4GGT4_73C11_BARVU
Bca_GomC04g12040.mRNA1 Terpenoid UGT medium pass UGT__00111__sp_Q9ZQ99_U73C1_ARATH
Bca_GomC04g18430.mRNA1 Terpenoid UGT medium pass UGT__00108__sp_Q9SYK9_U74E2_ARATH
Bca_GomC04g20400.mRNA1 Terpenoid UGT medium pass UGT__00038__sp_K4CWS6_U75C1_SOLLC
Bca_GomC04g20410.mRNA1 Terpenoid UGT low borderline UGT__00105__sp_Q9SK82_U85A1_ARATH
Bca_GomC04g20870.mRNA1 Terpenoid UGT medium pass UGT__00059__sp_O82382_U71C2_ARATH
Bca_GomC04g20880.mRNA1 Terpenoid UGT medium pass UGT__00059__sp_O82382_U71C2_ARATH
Bca_GomC04g20900.mRNA1 Terpenoid UGT medium pass UGT__00059__sp_O82382_U71C2_ARATH
Bca_GomC04g20910.mRNA1 Terpenoid UGT medium pass UGT__00060__sp_O82383_U71D1_ARATH
Bca_GomC04g21020.mRNA1 Terpenoid UGT low borderline UGT__00059__sp_O82382_U71C2_ARATH
Bca_GomC04g28940.mRNA1 Terpenoid UGT medium pass UGT__00090__sp_Q9LML7_U71C3_ARATH
Bca_GomC04g37530.mRNA1 Terpenoid UGT medium pass UGT__00045__sp_K4GKX2_73C10_BARVU
Bca_GomC04g47720.mRNA1 Terpenoid UGT medium pass UGT__00035__sp_I1KEV6_FG3H_SOYBN
Bca_GomC04g49820.mRNA1 Terpenoid UGT medium pass UGT__00105__sp_Q9SK82_U85A1_ARATH
Bca_GomC04g49910.mRNA1 Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA
Bca_GomC04g49920.mRNA1 Terpenoid UGT medium pass UGT__00105__sp_Q9SK82_U85A1_ARATH
Bca_GomC04g50190.mRNA1 Terpenoid UGT medium pass UGT__00105__sp_Q9SK82_U85A1_ARATH
Bca_GomC04g50500.mRNA1 Terpenoid UGT medium pass UGT__00094__sp_Q9LSY4_U71B8_ARATH
Bca_GomC04g50510.mRNA1 Terpenoid UGT medium pass UGT__00096__sp_Q9LSY8_U71B2_ARATH
Bca_GomC04g52140.mRNA1 Terpenoid UGT medium pass UGT__00054__sp_O23406_U75D1_ARATH
Bca_GomC04g53490.mRNA1 Terpenoid UGT medium pass UGT__00106__sp_Q9SKC5_U74D1_ARATH
Bca_GomC04g53530.mRNA1 Terpenoid UGT medium pass UGT__00108__sp_Q9SYK9_U74E2_ARATH
Bca_GomC04g55230.mRNA1 Terpenoid UGT medium pass UGT__00102__sp_Q9LZD8_U89A2_ARATH
Bca_GomC04g55390.mRNA1 Terpenoid UGT medium pass UGT__00102__sp_Q9LZD8_U89A2_ARATH
Bca_GomC04g57990.mRNA1 Terpenoid UGT medium pass UGT__00111__sp_Q9ZQ99_U73C1_ARATH
Bca_GomC05g02760.mRNA1 Terpenoid UGT medium pass UGT__00092__sp_Q9LNI1_U72B3_ARATH
Bca_GomC05g06600.mRNA1 Terpenoid UGT medium pass UGT__00093__sp_Q9LR44_U75B1_ARATH
Bca_GomC05g07220.mRNA1 Terpenoid UGT medium pass UGT__00093__sp_Q9LR44_U75B1_ARATH
Bca_GomC05g07350.mRNA1 Terpenoid UGT medium pass UGT__00108__sp_Q9SYK9_U74E2_ARATH
Bca_GomC05g19050.mRNA1 Terpenoid UGT medium pass UGT__00076__sp_Q8L7M0_TUN_ARATH
Bca_GomC05g25800.mRNA1 Terpenoid UGT medium pass UGT__00105__sp_Q9SK82_U85A1_ARATH
Bca_GomC05g26010.mRNA1 Terpenoid UGT medium pass UGT__00105__sp_Q9SK82_U85A1_ARATH
Bca_GomC05g27550.mRNA1 Terpenoid UGT medium pass UGT__00055__sp_O48676_U74B1_ARATH
Bca_GomC05g39400.mRNA1 Terpenoid UGT medium pass UGT__00024__sp_B3VI56_U91D2_STERE
Bca_GomC05g40360.mRNA1 Terpenoid UGT medium pass UGT__00064__sp_P0DO71_GT941_SIRGR
Bca_GomC05g42150.mRNA1 Terpenoid UGT medium pass UGT__00081__sp_Q9C768_U76B1_ARATH
Bca_GomC05g42580.mRNA1 Terpenoid UGT medium pass UGT__00095__sp_Q9LSY6_U71B6_ARATH
Bca_GomC05g42600.mRNA1 Terpenoid UGT medium pass UGT__00096__sp_Q9LSY8_U71B2_ARATH
Bca_GomC05g42610.mRNA1 Terpenoid UGT medium pass UGT__00097__sp_Q9LSY9_U71B1_ARATH
Bca_GomC05g42630.mRNA1 Terpenoid UGT medium pass UGT__00097__sp_Q9LSY9_U71B1_ARATH
Bca_GomC05g42860.mRNA1 Terpenoid UGT medium pass UGT__00100__sp_Q9LVF0_U84A2_ARATH
Bca_GomC05g48670.mRNA1 Terpenoid UGT medium pass UGT__00088__sp_Q9LK73_U88A1_ARATH
Bca_GomC05g55550.mRNA1 Terpenoid UGT medium pass UGT__00081__sp_Q9C768_U76B1_ARATH
Bca_GomC06g03280.mRNA1 Terpenoid UGT medium pass UGT__00043__sp_K4GHS2_73C13_BARVU
Bca_GomC06g03290.mRNA1 Terpenoid UGT medium pass UGT__00043__sp_K4GHS2_73C13_BARVU
Bca_GomC06g09570.mRNA1 Terpenoid UGT medium pass UGT__00102__sp_Q9LZD8_U89A2_ARATH
Bca_GomC06g27540.mRNA1 Terpenoid UGT medium pass UGT__00081__sp_Q9C768_U76B1_ARATH
Bca_GomC06g27650.mRNA1 Terpenoid UGT medium pass UGT__00081__sp_Q9C768_U76B1_ARATH
Bca_GomC06g59390.mRNA1 Terpenoid UGT medium pass UGT__00056__sp_O48715_U76D1_ARATH
Bca_GomC07g06350.mRNA1 Terpenoid UGT medium pass UGT__00079__sp_Q94A84_U72E1_ARATH