PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

/

Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
Reset
Protein/Isoform Record Pathway Family Confidence Status Best Target
Bca_GomC07g10610.mRNA1 Terpenoid UGT medium pass UGT__00112__sp_Q9ZQG4_U73B5_ARATH
Bca_GomC07g15420.mRNA1 Terpenoid UGT medium pass UGT__00079__sp_Q94A84_U72E1_ARATH
Bca_GomC07g17210.mRNA1 Terpenoid UGT medium pass UGT__00051__sp_O23382_U71B5_ARATH
Bca_GomC07g17410.mRNA1 Terpenoid UGT medium pass UGT__00070__sp_Q5XF20_U84A1_ARATH
Bca_GomC07g24670.mRNA1 Terpenoid UGT medium pass UGT__00105__sp_Q9SK82_U85A1_ARATH
Bca_GomC07g24680.mRNA1 Terpenoid UGT medium pass UGT__00105__sp_Q9SK82_U85A1_ARATH
Bca_GomC07g24690.mRNA1 Terpenoid UGT medium pass UGT__00105__sp_Q9SK82_U85A1_ARATH
Bca_GomC07g26670.mRNA1 Terpenoid UGT medium pass UGT__00057__sp_O81498_U72E3_ARATH
Bca_GomC07g46050.mRNA1 Terpenoid UGT medium pass UGT__00079__sp_Q94A84_U72E1_ARATH
Bca_GomC07g46060.mRNA1 Terpenoid UGT medium pass UGT__00079__sp_Q94A84_U72E1_ARATH
Bca_GomC07g47850.mRNA1 Terpenoid UGT medium pass UGT__00070__sp_Q5XF20_U84A1_ARATH
Bca_GomC07g47880.mRNA1 Terpenoid UGT medium pass UGT__00054__sp_O23406_U75D1_ARATH
Bca_GomC07g47890.mRNA1 Terpenoid UGT medium pass UGT__00054__sp_O23406_U75D1_ARATH
Bca_GomC07g67370.mRNA1 Terpenoid UGT medium pass UGT__00009__sp_A0A0G4DBR5_FG3N_SOYBN
Bca_GomC07g67380.mRNA1 Terpenoid UGT medium pass UGT__00035__sp_I1KEV6_FG3H_SOYBN
Bca_GomC08g04920.mRNA1 Terpenoid UGT medium pass UGT__00108__sp_Q9SYK9_U74E2_ARATH
Bca_GomC08g13640.mRNA1 Terpenoid UGT medium pass UGT__00069__sp_Q0WW21_U75C1_ARATH
Bca_GomC08g15530.mRNA1 Terpenoid UGT medium pass UGT__00054__sp_O23406_U75D1_ARATH
Bca_GomC08g15540.mRNA1 Terpenoid UGT medium pass UGT__00054__sp_O23406_U75D1_ARATH
Bca_GomC08g22590.mRNA1 Terpenoid UGT medium pass UGT__00046__sp_K4GMD6_73C9_BARVU
Bca_GomC08g30410.mRNA1 Terpenoid UGT medium pass UGT__00112__sp_Q9ZQG4_U73B5_ARATH
Bca_GomC08g34950.mRNA2 Terpenoid UGT medium pass UGT__00045__sp_K4GKX2_73C10_BARVU
Bca_GomC08g34960.mRNA1 Terpenoid UGT medium pass UGT__00109__sp_Q9ZQ94_U73C5_ARATH
Bca_GomC08g34970.mRNA1 Terpenoid UGT medium pass UGT__00019__sp_A0A2R4LMF9_73C25_BARVU
Bca_GomC08g35770.mRNA1 Terpenoid UGT medium pass UGT__00041__sp_K4GGT4_73C11_BARVU
Bca_GomC08g37820.mRNA1 Terpenoid UGT medium pass UGT__00081__sp_Q9C768_U76B1_ARATH
Bca_GomC08g38250.mRNA1 Terpenoid UGT medium pass UGT__00073__sp_Q6VAB4_U76G1_STERE
Bca_GomC08g47880.mRNA1 Terpenoid UGT medium pass UGT__00090__sp_Q9LML7_U71C3_ARATH
Bca_GomC08g49250.mRNA1 Terpenoid UGT medium pass UGT__00048__sp_O22182_U84B1_ARATH
Bca_GomC08g52160.mRNA1 Terpenoid UGT medium pass UGT__00099__sp_Q9LTH3_U76E1_ARATH
Bca_GomC08g55050.mRNA1 Terpenoid UGT medium pass UGT__00076__sp_Q8L7M0_TUN_ARATH
Bca_GomC08g62850.mRNA1 Terpenoid UGT medium pass UGT__00091__sp_Q9LNE6_U89C1_ARATH
Bca_GomC09g03230.mRNA1 Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
Bca_GomC09g08950.mRNA1 Terpenoid UGT medium pass UGT__00090__sp_Q9LML7_U71C3_ARATH
Bca_GomC09g13240.mRNA1 Terpenoid UGT medium pass UGT__00101__sp_Q9LVR1_U72E2_ARATH
Bca_GomC09g28420.mRNA1 Terpenoid UGT medium pass UGT__00024__sp_B3VI56_U91D2_STERE
Bca_GomC09g35940.mRNA1 Terpenoid UGT medium pass UGT__00035__sp_I1KEV6_FG3H_SOYBN
Bca_GomC09g40240.mRNA1 Terpenoid UGT medium pass UGT__00098__sp_Q9LTH2_U76E2_ARATH
Bca_GomC09g40260.mRNA1 Terpenoid UGT medium pass UGT__00098__sp_Q9LTH2_U76E2_ARATH
Bca_GomC09g49910.mRNA1 Terpenoid UGT medium pass UGT__00109__sp_Q9ZQ94_U73C5_ARATH
Bca_GomC09g52520.mRNA1 Terpenoid UGT medium pass UGT__00078__sp_Q8W491_U73B3_ARATH
Bca_GomC09g53920.mRNA1 Terpenoid UGT medium pass UGT__00100__sp_Q9LVF0_U84A2_ARATH
Bca_GomC09g59600.mRNA1 Terpenoid UGT medium pass UGT__00085__sp_Q9FIA0_U76C2_ARATH
Bca_GomC09g59610.mRNA1 Terpenoid UGT medium pass UGT__00084__sp_Q9FI99_U76C1_ARATH
Bca_GomC09g59620.mRNA1 Terpenoid UGT medium pass UGT__00085__sp_Q9FIA0_U76C2_ARATH
Bca_GomC09g59640.mRNA1 Terpenoid UGT medium pass UGT__00085__sp_Q9FIA0_U76C2_ARATH
Bca_GomC09g59650.mRNA2 Terpenoid UGT medium pass UGT__00084__sp_Q9FI99_U76C1_ARATH
Bca_GomC09g59660.mRNA1 Terpenoid UGT medium pass UGT__00084__sp_Q9FI99_U76C1_ARATH
Bca_GomC09g59670.mRNA1 Terpenoid UGT medium pass UGT__00085__sp_Q9FIA0_U76C2_ARATH
Bca_GomC09g59910.mRNA1 Terpenoid UGT medium pass UGT__00084__sp_Q9FI99_U76C1_ARATH